Rhodococcus pseudokoreensis: JWS13_17010
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Entry
JWS13_17010 CDS
T08508
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
rpsk
Rhodococcus pseudokoreensis
Brite
KEGG Orthology (KO) [BR:
rpsk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rpsk03400
]
JWS13_17010
Enzymes [BR:
rpsk01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
JWS13_17010
DNA repair and recombination proteins [BR:
rpsk03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
JWS13_17010
Prokaryotic type
JWS13_17010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Vir_act_alpha_C
Motif
Other DBs
NCBI-ProteinID:
QSE90199
LinkDB
All DBs
Position
complement(2594898..2596238)
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AA seq
446 aa
AA seq
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MDTALVWFRRDLRLGDLPTLHTVAESGARALGLFVLDDRLLKTSGGARRDFLFRSLAALD
DSLGGRLLVVKGDPVEVVPRVAKKVAAEEVHVSADYGPYGRERDAAVAEHVDLVATGSPY
AVAPGRVTKADGEPYRVFTPYFRQWLDHGWRAPIDTGPATVEWMDPDDVKTRRVQIPEPE
SDGYAAGEAAALERWAEFCEDDLAGYEDARDRPGLDATSRMSVYLKYGNIHPRTMLRDLA
RRRSKSAEQYRRQLAWRDFYADILFQRPDSARGNYDRRFDHIRYDSGPDAEEAYTAWCEG
RTGFPIVDAGMRQLKAEGWMHNRVRMIVASFFVKDLHLPWWRGARYFMNQLVDGDLANNQ
HGWQWTAGSGTDASPYFRVFNPTTQGEKFDPDGEYVRRWVPELRGISGKAVHALKDGRPE
EYPPPIVDHAHERQEALARYGEIKTP
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atggacaccgcactcgtctggttccgccgcgacctccggctcggcgacctgccgacgctc
cacacggtcgccgagtcgggtgcgcgtgcgctcggcctgttcgtcctcgacgatcgcctg
ctgaagacgtcgggcggtgctcgccgggacttcctgttccgcagcctcgcggcgctggac
gacagcctcggcggccggttgctggtggtgaagggcgatcccgtcgaggtggttccgcgg
gtggcgaagaaggtcgcggccgaagaggtgcacgtcagcgccgactacggaccctacggt
cgcgagcgggatgccgccgtcgccgagcacgtcgatctggtggccaccggttcgccgtat
gccgtggcgcccggccgcgtgacgaaggcggacggggaaccgtaccgcgtgttcaccccg
tacttccggcagtggctcgaccacgggtggcgcgcgccgatcgacaccgggcccgcgacg
gtggagtggatggacccggacgacgtgaagacgcggcgggtgcagatcccggaacccgaa
tccgacgggtacgccgcgggggaggcggcggcgctggaacggtgggcggagttctgcgag
gacgacctcgccgggtacgaggacgcgcgggatcgtcccgggctcgacgcgaccagccgg
atgtcggtgtacctgaagtacggcaacattcatccgcggacgatgctccgcgatctcgcc
cgccgccgcagcaagagcgccgagcagtaccggcggcagctcgcgtggcgggacttctac
gccgacatcctcttccagcgccccgacagcgcacggggaaactacgaccgccgcttcgac
cacatccgctacgacagcgggcccgacgccgaggaggcgtacacggcgtggtgcgagggc
cggacgggattcccgatcgtcgatgccgggatgcgccagctgaaagccgaaggctggatg
cacaaccgggtgcggatgatcgtcgcgtcgttcttcgtcaaggatctgcacctgccgtgg
tggcggggcgcccgctacttcatgaaccaactcgtcgacggcgacctggcgaacaaccag
cacggctggcagtggacggcgggatccgggacggacgcgtcgccgtacttccgggtgttc
aacccgacgacgcagggggagaagttcgaccccgacggcgaatacgtgcggcggtgggtg
cccgaactgcgcggcatctccgggaaggccgtccacgccctgaaagacggccgccccgaa
gagtatccgccgccgatcgtcgaccacgcccacgaacgccaggaggccctggcgaggtac
ggcgagatcaagaccccgtga
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