Rhodococcus pseudokoreensis: JWS13_18345
Help
Entry
JWS13_18345 CDS
T08508
Name
(GenBank) SigB/SigF/SigG family RNA polymerase sigma factor
KO
K03090
RNA polymerase sigma-B factor
Organism
rpsk
Rhodococcus pseudokoreensis
Brite
KEGG Orthology (KO) [BR:
rpsk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rpsk03021
]
JWS13_18345
Transcription machinery [BR:
rpsk03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
JWS13_18345
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
MarR_2
HTH_3
MarR
HTH_Crp_2
HTH_23
HTH_IclR
HTH_24
DUF7343
HTH_20
HTH_31
DUF134
LacI
Motif
Other DBs
NCBI-ProteinID:
QSE90443
LinkDB
All DBs
Position
2886184..2887092
Genome browser
AA seq
302 aa
AA seq
DB search
MNVSTQLVEPSLDIRRIPTRSKPAHRPKPVADAARSERRQARPETARRDRDQYRDVPAQC
EAIGRLAVSDPRRELLRQRLIERCLPLAEHIARRFLGRGEPLDDLIQVARLGLVKAVDRF
DSNCGASFVSYAVPTITGEVRRHFRDTGWAMHVPRSMQELHLSLTTATTELTTTLGRAPT
ASELAEALGIDKEEVVRGLRVADAYSTLSVDFPLGEDERPLSETIGDLDPSLAHVEDHVV
LEPLLGSLPDLERTVLVLRFFGNMTQSQIAARVGVSQMQVSRLLTKTLADLRGKLAGGQM
VG
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtgtccacccagctcgtcgaaccatcgctcgacatccgacgcatccccacgcgg
tcgaagccggcgcatcgcccgaagcccgtcgccgacgccgcacggagcgagcgtcggcag
gcgcgaccggagaccgcgcgccgcgatcgtgaccagtaccgggacgtgcccgcgcagtgc
gaggccatcggccgtctcgccgtctccgacccccgccgcgaactgctgcggcagcggctg
atcgagcggtgcctgccgctcgccgaacacatcgcgcggcggtttctcggtcgcggagaa
cccctcgacgacctgatccaggtcgcccgcctcggcctggtcaaggccgtcgaccggttc
gactcgaattgcggggcgagcttcgtgtcctacgccgtcccgacgatcaccggcgaagtg
cgcaggcacttccgcgacaccggctgggcgatgcacgtcccgcgcagcatgcaggaactg
cacctctccctcaccaccgcgacgaccgaactgaccaccacactcggacgcgccccgacg
gcgagcgaactggccgaggccctcgggatcgacaaggaggaggtggtccggggtctgcgg
gtcgccgacgcctacagcaccctgtccgtcgacttcccgctcggggaggacgagcgcccg
ctgtcggagacgatcggcgacctcgacccgtcgctcgcacacgtcgaggaccatgtcgtc
ctcgagccgctgctgggttcgcttcccgacctcgaacgcaccgtcctcgtcctgcggttc
ttcggcaacatgactcagtcgcagatcgccgcgcgggtgggcgtctcgcagatgcaggtg
tcccggctgttgaccaagaccctggcggacctgcgcgggaaactcgccggcggtcagatg
gtcgggtag
DBGET
integrated database retrieval system
