KEGG   Rhodococcus pseudokoreensis: JWS13_18870
Entry
JWS13_18870       CDS       T08508                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
rpsk  Rhodococcus pseudokoreensis
Pathway
rpsk00010  Glycolysis / Gluconeogenesis
rpsk00020  Citrate cycle (TCA cycle)
rpsk00260  Glycine, serine and threonine metabolism
rpsk00280  Valine, leucine and isoleucine degradation
rpsk00310  Lysine degradation
rpsk00380  Tryptophan metabolism
rpsk00620  Pyruvate metabolism
rpsk00630  Glyoxylate and dicarboxylate metabolism
rpsk00640  Propanoate metabolism
rpsk00670  One carbon pool by folate
rpsk00785  Lipoic acid metabolism
rpsk01100  Metabolic pathways
rpsk01110  Biosynthesis of secondary metabolites
rpsk01120  Microbial metabolism in diverse environments
rpsk01200  Carbon metabolism
rpsk01210  2-Oxocarboxylic acid metabolism
rpsk01240  Biosynthesis of cofactors
Module
rpsk_M00009  Citrate cycle (TCA cycle, Krebs cycle)
rpsk_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
rpsk_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
rpsk_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:rpsk00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    JWS13_18870 (lpdA)
   00020 Citrate cycle (TCA cycle)
    JWS13_18870 (lpdA)
   00620 Pyruvate metabolism
    JWS13_18870 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    JWS13_18870 (lpdA)
   00640 Propanoate metabolism
    JWS13_18870 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    JWS13_18870 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    JWS13_18870 (lpdA)
   00310 Lysine degradation
    JWS13_18870 (lpdA)
   00380 Tryptophan metabolism
    JWS13_18870 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    JWS13_18870 (lpdA)
   00670 One carbon pool by folate
    JWS13_18870 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rpsk04147]
    JWS13_18870 (lpdA)
Enzymes [BR:rpsk01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     JWS13_18870 (lpdA)
Exosome [BR:rpsk04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   JWS13_18870 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 HI0933_like AlaDh_PNT_C FAD_oxidored GIDA NAD_binding_8 FAD_binding_2 DAO Amino_oxidase 3HCDH_N XdhC_C UDPG_MGDP_dh_N Trp_halogenase Thi4 NAD_binding_9
Other DBs
NCBI-ProteinID: QSE90537
LinkDB
Position
3012143..3013513
AA seq 456 aa
MTDNPDVLILGGGSGGYAAAFRAAQLGKTVTLIEEDKVGGTCLHRGCIPTKALVHAAEVV
NTVSHASSMGIGATLGDIDIPAVHKYKDGIVDRLYKGLQGLVRSHKIDLVSGTGHYTGST
TIRVNDRTITGRDLVLATGSHVCSLPGLEIGGRILTSDDALRYPTLPGRVIVLGGGIIGV
EFASIWAALGAEVTIIEALPRLVAGEDEWTSKQLTRAFRKRGITTLTDTRFTSAEQSDNS
VTVTVESGQTIEADVLLVAVGRGPRTAGIGAAENGIDLDDRGFVKVDGQLRTNVPNVYAV
GDIVAGPQLAHRGFQQGLFVADAIAGTPRTPVEDQNIPRVAYSQPEIASVGLTEAQAAER
YSQVTTSVYDLAGNGKSQILGTSGGVKLVRADGGAVVGIHMVGERVGELIGEAQLIVSWG
AYPDEVAQLIHAHPTQAEALGEAHLALAGQPLHAHG
NT seq 1371 nt   +upstreamnt  +downstreamnt
gtgactgacaatcccgacgtcctcatcctcggcggtggatcaggcggctacgctgccgcc
ttccgcgccgctcagctcggcaagaccgtcaccctgatcgaagaggacaaggtcggcggc
acctgcctacaccgcggatgcattcccaccaaggcactcgtccacgccgccgaggtcgtc
aacaccgtctcccacgccagcagtatggggatcggcgccaccctcggcgatatcgacatc
cccgcagtccacaaatacaaagacggcatcgtcgaccgactctacaaaggactgcaaggc
ctggtccgaagccacaaaatcgacctcgtatcaggaaccggtcactacaccggcagcacc
accatccgcgtcaatgaccgcacaatcaccggtcgagacctcgtgttggctaccgggtct
cacgtttgcagccttcccggactcgagatcggtggtcgcatcctgaccagtgacgacgcc
ctgagataccccactctgcccggccgcgtcatcgtgctcggcggcggcatcatcggcgtc
gagttcgcgagcatctgggcagcgctcggtgccgaggtcaccattatcgaggcactaccc
cgactagtggccggcgaagacgagtggacgtctaagcaactcacccgggccttccggaaa
cgcgggatcaccaccttgaccgacacccgattcaccagcgccgagcaaagcgacaactcc
gtcaccgtcaccgtcgaatccggccaaaccatcgaagcggacgtactgctggtcgcggtg
gggcgaggacctcgcacagccggtatcggcgcggcagagaacggcatcgacctggacgat
cgcggcttcgtcaaggtggatggtcaactgcgcaccaatgtgccgaatgtgtatgcagtc
ggcgatatcgtcgccggcccgcaactcgcccaccgcggcttccaacaaggactcttcgtc
gccgatgcgatcgcgggaaccccacgtacgcccgtcgaggaccagaacatccctcgggtc
gcgtactcgcagccggagatcgcatccgtcggtctgacggaggcgcaagcagctgaacgg
tactcacaggtcacgacatccgtctacgacctcgccgggaatggaaagagtcagattctc
ggcaccagtggtggtgtgaaactcgttcgcgccgacgggggtgccgtggttgggattcac
atggttggagaacgggtcggcgaactcatcggggaagcccaactcatcgtcagctggggt
gcctaccctgacgaggtggcccagctcatccacgcccacccgacccaggcagaggcgctc
ggcgaagcccatctcgccttggccggccagccgttacacgcccacggttag

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