KEGG   Rhodococcus pseudokoreensis: JWS13_19580
Entry
JWS13_19580       CDS       T08508                                 
Name
(GenBank) AMP-binding protein
  KO
K01897  long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
Organism
rpsk  Rhodococcus pseudokoreensis
Pathway
rpsk00061  Fatty acid biosynthesis
rpsk00071  Fatty acid degradation
rpsk01100  Metabolic pathways
rpsk01212  Fatty acid metabolism
rpsk02024  Quorum sensing
rpsk04146  Peroxisome
Module
rpsk_M00086  beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:rpsk00001]
 09100 Metabolism
  09103 Lipid metabolism
   00061 Fatty acid biosynthesis
    JWS13_19580
   00071 Fatty acid degradation
    JWS13_19580
 09140 Cellular Processes
  09141 Transport and catabolism
   04146 Peroxisome
    JWS13_19580
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    JWS13_19580
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01004 Lipid biosynthesis proteins [BR:rpsk01004]
    JWS13_19580
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rpsk04147]
    JWS13_19580
Enzymes [BR:rpsk01000]
 6. Ligases
  6.2  Forming carbon-sulfur bonds
   6.2.1  Acid-thiol ligases
    6.2.1.3  long-chain-fatty-acid---CoA ligase
     JWS13_19580
Lipid biosynthesis proteins [BR:rpsk01004]
 Acyl-CoA ligase
  Long/very long chain acyl-CoA ligase
   JWS13_19580
Exosome [BR:rpsk04147]
 Exosomal proteins
  Exosomal proteins of breast milk
   JWS13_19580
  Exosomal proteins of breast cancer cells
   JWS13_19580
SSDB
Motif
Pfam: AMP-binding AMP-binding_C Lmo2445-like_C DUF5676
Other DBs
NCBI-ProteinID: QSE90665
LinkDB
Position
3163564..3165228
AA seq 554 aa
MDAVAGPWTRNYPAGVSAQLTASLPTMLQAWNEHVHTRPDAAAVHYFDATLTFADIDRTA
DALAAALQDNGLQTGDRVAIYLQNDPQWLVSMLAAWKSGAVPVAVNPMLRAKELLHILTD
SGARVLVCLDSLYAQVAQDIVGDTAVGTVVTTHPLDMTPDATVSPSLAAHIPARQSFSDA
LDWRTLVVEYDGRASTSSMPYAGDIGALTYTSGTTGRQKGAMNLQSAMMHSSTVYASWWD
LRPGRDVIVGLAPVFHITGLIAGLGVHIVSGAPIVLMHRFDAEETLRAIDRWRGTFMIGA
STAFIALSNHPALADVDVSSLTKTPSGGAAVGQALVDRVHAATGWTLRGAYGMTETTSPT
HLGPLDVDPPTDPESGALAVGVPVPGARVRIVDVGDGRDLGPGEAGEIVVSGPMVVPGYW
QLPEESAHAIRDGWLHTGDIGKMTEDGWLFVVDRLKDLINAGGYKIFPRDVEDVLYQHPA
VREASVVGVPDEYRGETVKAFVSLVPGAAARPEQLIDFCRDRMAAYKYPREVVILEELPK
NASGKLLRRELRHV
NT seq 1665 nt   +upstreamnt  +downstreamnt
atggacgctgttgcagggccctggacgaggaattaccccgcaggggtgtcagcgcagctg
accgcgtcgctcccgaccatgttgcaagcatggaacgagcacgtccataccaggccagac
gctgccgcggtccactatttcgatgccaccctgaccttcgccgacatcgatcgcaccgcc
gacgcgctggctgccgcgctccaggacaacgggttgcagacgggcgatcgggtcgcgatc
tatctgcagaacgacccccagtggctggtgtcgatgctcgcagcgtggaagtccggtgcc
gtacctgttgcggtcaatccaatgcttcgcgcgaaggaacttctgcacatcctcaccgac
tcgggcgcccgggtgctcgtgtgcctggacagcctctacgcgcaggtcgcgcaagacatc
gtcggcgacaccgcagtgggcacggtagtcaccacgcacccgctcgacatgacccccgac
gccaccgtgtcaccgtccttggcggcccacattcccgcgcgccaatccttctccgacgca
ctggattggcgcacgttggtggtcgagtacgacggccgtgcttcgacgtcgtcgatgccg
tacgcgggggatatcggtgctctgacctacacgtcgggcaccaccgggcggcagaagggg
gcgatgaacctgcagagcgccatgatgcacagctccaccgtgtacgcctcctggtgggac
ctgcgtccaggacgcgacgtgatcgtcggcctcgcaccggtattccacatcaccggtctc
atcgccggcctcggcgtccatatcgtcagcggtgccccgatcgtgctgatgcaccggttc
gatgcggaggagaccctgcgcgcgatcgatcgctggcgcggcaccttcatgatcggggca
agcaccgcgttcatcgcgctcagtaaccatcccgcgctggccgatgtcgacgtgtcgtcg
ctgaccaagaccccctcgggaggtgcggcagtgggccaggcactcgtcgaccgcgtccac
gccgccaccggctggacgttgcggggcgcctacggcatgaccgagacgacatcaccgacg
catctcggccccctcgatgtcgacccgcctaccgatcccgaatccggtgctctggcagtg
ggagttcccgttcccggcgcgcgtgtgcggatcgtcgatgtcggcgacggacgcgacctg
ggaccgggagaggccggcgagatcgtcgtgtccggcccgatggtggtgcccggttactgg
caactgccggaggagtccgcccacgccatccgggacggttggctgcataccggggacatc
ggcaagatgaccgaggacggctggctgttcgtcgtcgaccggctcaaggacctgatcaac
gccggtgggtacaagatcttcccgcgcgacgtcgaagacgttctctaccagcatccggcg
gtccgggaggcgtccgtcgtgggtgtgccggacgagtatcggggtgagacggtcaaggcg
ttcgtttccctggtcccaggcgccgccgcccgtccggagcaactcatcgacttctgccgg
gaccgcatggcggcatacaagtacccgcgggaggtcgtcattctcgaggaacttcccaag
aacgcgagtggaaaactgctgagacgggagctgcgccatgtctga

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