Rhodococcus pseudokoreensis: JWS13_21485
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Entry
JWS13_21485 CDS
T08508
Name
(GenBank) ABC transporter substrate-binding protein
KO
K15580
oligopeptide transport system substrate-binding protein
Organism
rpsk
Rhodococcus pseudokoreensis
Pathway
rpsk01501
beta-Lactam resistance
rpsk02010
ABC transporters
rpsk02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rpsk00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
JWS13_21485
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
JWS13_21485
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
JWS13_21485
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rpsk02000
]
JWS13_21485
Transporters [BR:
rpsk02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Oligopeptide transporter
JWS13_21485
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
AcrIIA4
Motif
Other DBs
NCBI-ProteinID:
QSE91015
LinkDB
All DBs
Position
complement(3579033..3580649)
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AA seq
538 aa
AA seq
DB search
MRITRVATAVLAVGLAAGMLSACSSGDSSGGGGSGIVNAWAGEPQNPLIPTNTSENQGGR
VVDALFAGLVSYDSDGGVNNEVAESIETTDGKNFTVKLKDGWTFTDGTPVTAASFVDAWN
YGALSTNAQLQASFFDPIQGYDEVAAENPTAQTMSGLKVVDDSTFTIELKQPESAFPDRL
GFAAYYPLPAVAYQDMAAFGENPVGNGPYMMSGPGAWQHNVRIDTVVNPDYNGNRKPKNA
GVDFVMYNSLDTAYTDLLAGNVDVLDQVPPSAVTTFETDLPGRTVNQPSATIETFTIPGR
LPHFSGEEGTLRRQAISMAINRDQITQQIYNNTRTPALDFTSPAIEGWSDSLVGNSNLKY
DPEAAKKLWAQADAIAPWSGSFEIAYNGDGGHKEWVDATANNIRNTLGIDAKGKEYPTFA
QIRTEATNRTIPSAFRSGWQGDYPQQYGFLAQNYQTGGSSNDGDYSNPEFDRLLRASAGE
VDPDKAQDLLNQAQEVLLHDLPAVPTWYRNAASGWSENVSNVVIDWKGIPMYSDIEKN
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
ttgcgcatcacacgtgtggcaaccgccgttctggcggtcggcctggcagcagggatgctg
tccgcctgctcgtccggtgactcgtcgggcggaggtggcagcggcatcgtcaacgcctgg
gcgggtgaaccgcagaatccgttgattcccaccaataccagcgagaaccagggtggccgc
gtcgtcgatgcgctgttcgcgggactcgtgtcctacgactccgacggtggcgtgaacaac
gaggtcgccgagtccatcgagacgaccgacggcaagaacttcaccgtgaaactgaaggac
ggctggacgttcacggacggcacgccggtcaccgcggcctcgttcgtcgacgcctggaac
tacggcgcgctgtcgacgaatgcgcagctccaggcgtccttcttcgacccgatccagggc
tacgacgaggtggctgccgagaaccccacggcgcagaccatgtcgggactgaaggtggtc
gacgactcgacgttcacgatcgaactgaagcaacccgagtccgccttcccggaccgtctc
gggttcgccgcgtactacccgctgccggcggtggcgtaccaggacatggccgcgttcggg
gagaatcccgtcggcaacggtccgtacatgatgtcgggacccggggcgtggcagcacaac
gtgcggatcgacaccgtcgtgaaccccgactacaacggcaaccgcaagccgaagaacgcc
ggcgtcgacttcgtcatgtacaacagcctcgacacggcgtacacggatctgctcgcgggc
aacgtcgacgtcctcgaccaggtgccgccgagcgccgtcaccacgttcgagaccgacctg
ccgggtcggaccgtgaaccagccgtccgcgaccatcgagacgttcacgatcccgggccgg
ctgccgcatttcagcggtgaggagggcacgctgcgccggcaggccatctcgatggcgatc
aaccgcgatcagatcacccagcagatctacaacaacacccgcacccccgcgctcgacttc
accagccccgccatcgagggctggtcggattcgcttgtgggcaacagcaacctgaagtac
gacccggaggcggcgaagaagctgtgggcccaggccgacgccatcgccccgtggtcgggc
agtttcgagatcgcgtacaacggcgacggcggccacaaggagtgggtcgacgccaccgcc
aacaacatccgcaacacgctcggcatcgacgcgaagggcaaggagtacccgacgttcgcg
cagatccgcacggaggccaccaaccggaccatccccagcgcgttccgttcggggtggcag
ggcgactacccgcagcagtacggcttcctcgcgcagaactaccagaccggcggcagctcc
aacgacggcgactactcgaaccccgagttcgaccggctgctgcgcgcctctgcgggtgag
gtcgatcccgacaaggcgcaggacctgctgaaccaggcgcaggaggtcctcctgcacgac
ctgcccgcggtcccgacgtggtaccgcaacgcggcgagcggctggtccgagaacgtgtcg
aacgtggtcatcgactggaagggcatcccgatgtattcggacatcgagaagaactga
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