Rhodococcus pseudokoreensis: JWS13_22060
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Entry
JWS13_22060 CDS
T08508
Name
(GenBank) DNA polymerase III subunit gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
rpsk
Rhodococcus pseudokoreensis
Pathway
rpsk03030
DNA replication
rpsk03430
Mismatch repair
rpsk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rpsk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
JWS13_22060
03430 Mismatch repair
JWS13_22060
03440 Homologous recombination
JWS13_22060
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rpsk03032
]
JWS13_22060
03400 DNA repair and recombination proteins [BR:
rpsk03400
]
JWS13_22060
Enzymes [BR:
rpsk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
JWS13_22060
DNA replication proteins [BR:
rpsk03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
JWS13_22060
DNA repair and recombination proteins [BR:
rpsk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
JWS13_22060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
AAA
AAA_22
DNAX_ATPase_lid
RuvB_N
DnaX_C
AAA_30
Rad17
AAA_16
AAA_19
AAA_5
Mg_chelatase
AAA_14
nSTAND3
Herpes_Helicase
Motif
Other DBs
NCBI-ProteinID:
QSE91124
LinkDB
All DBs
Position
complement(3717827..3720073)
Genome browser
AA seq
748 aa
AA seq
DB search
MALYRKYRPASFAEVVGQEHVTEPLSTALDAGRINHAYLFSGPRGCGKTSSARILARSLN
CVEGPTSTPCGQCPSCVALGPGGSGNLDVTELDAASHGGVDDTRELRDRAFYAPAESRYR
VFIVDEAHMVTTAGFNALLKIVEEPPEHLIFIFATTEPEKVLPTIRSRTHHYPFRLLAPT
TMRGLLEKICLQESVPVADPVYPLVIRAGGGSPRDSLSILDQLLAGAGDEGVTYPRALAL
LGVTDVALIDDAVDALATGDGAALFGTVDRVMDAGHDPRRFAVDLLERLRDLILMQAVPD
AAERGLVDAPGDVLENMRAQVQRIGPATLTRYAEVIHAGLGEMRGATAPRLLLEVMCARM
LLPSASDAESAVLQRLERVERGLPPAGSAPVAAAAAAERPAAAPERAPQPPAEPEPEPKF
QRPSMRQAAAATVPPPPEPEPEPMPRPVPEPAPAPVPEPEPTPQPEPTPVPEPTPAPEPT
PQPVPEPEPAPTPVPEPTPEPEPAPAPAPEPEPEPPLAPEVEAAPAASAGPDVATLREAW
NSLREKVSQRNKILPAMLSAATVHDVQGNRLILAHPVPNLGARIASPHNAQVITEVLSEM
FGGTWEVEYQAGAPTAPPPPVAKAAAAPTKPAGAPRFSRPSQERAAQRPPQQQSDGQRTD
AGSGAAQARPSSEPDDDIPPPEAPDYPDDPGPIDYEASASTPPVSTPEDEEEMFKEAAEP
ADPATRRDPEDVAFELLKDMLGAKKLEG
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
gtggccctgtaccggaagtaccgacccgcatccttcgccgaggtggtggggcaggagcac
gtcaccgaaccactgagcaccgctctcgacgccggacggatcaaccacgcgtatctgttc
tccggtccccgcggctgtggcaagacgtcgtctgcccgcatcctggcccgatcgctgaac
tgcgtggagggcccgacctcgacgccgtgcggccagtgcccctcgtgcgtggcgctcggc
cccggcgggtcgggcaacctcgacgtcaccgaactcgacgcggccagccacggtggcgtc
gacgacacccgtgagctgcgcgaccgcgcgttctacgcgcccgccgagtcgcggtaccgg
gtgttcatcgtggacgaggcccacatggtcaccacggcgggtttcaacgccctcctcaag
atcgtggaggagccgccggagcacctcatcttcatcttcgcgaccaccgaacccgagaag
gtgctgccgaccatccgttcgcgcacccatcactatccgttccggttgctcgcgccgacg
acgatgcgcgggctgctggagaagatctgcctgcaggagagcgtgccggtcgccgacccg
gtgtatccgctggtcatccgcgccggcggtgggtccccgcgtgactcgctgagcatcctc
gaccagctcctcgccggcgccggcgacgagggcgtcacctacccgcgcgcgctcgcgctg
ctcggcgtcaccgacgtcgcgctgatcgacgacgccgtcgacgcgctggccaccggcgac
ggcgccgcgctgttcgggacggtcgaccgcgtcatggacgccgggcacgatccgcgccgc
ttcgccgtcgacctgctcgagcgcctgcgcgacctgatcctgatgcaggcggtccccgac
gccgccgaacgtggcctcgtcgacgctcccggcgacgtgctcgagaacatgcgcgcccag
gtccagcggatcggtcccgccacgctaacccggtacgccgaggtgatccacgccggtctc
ggcgagatgcgcggcgccaccgccccccgactgctgctcgaagtgatgtgcgcccggatg
ctgctgccgtcggcgtccgatgcggagtcggccgtgctgcagcggctcgaacgcgtcgag
cgcggacttccgcccgcaggctccgcaccggtcgccgccgcagccgcagccgagcggccc
gccgcggcaccggagcgcgcgccgcaaccgcccgccgagccggaaccggagccgaagttc
cagcgaccgtcgatgcgccaggccgcggcggccaccgtgcccccgccgcccgagccggaa
cccgaaccgatgccgcggcccgttccggagcccgcgcctgcccccgttcccgaaccggag
ccgacgccgcagcccgaaccgacacccgttccggagccgacgccggcacccgagccgacg
ccgcagcccgtgcccgaaccggagcccgcgcccactcctgtgcccgagccgacgccggaa
cccgagccggcgcctgcacccgcgccggaacccgaaccggagccaccgctcgcgcccgag
gtggaggcggcacccgcagcgtcggcgggtccggatgttgcgaccctgcgggaggcctgg
aattcgctgcgcgagaaggtgagtcagcggaacaaaatccttcccgcgatgttgtcggcc
gccacggtgcacgacgtgcagggcaaccgcctgatcctggcgcacccggtccccaacctg
ggtgcccggatcgcgtcgccgcacaacgcccaggtgatcaccgaggtgctgtccgagatg
ttcggcggcacctgggaagtggagtatcaagctggtgctccgacggcgccgcccccaccg
gtcgcgaaggccgctgcggcgccgacgaagccggcgggtgcaccccggttctcccggccc
agccaggagcgggctgcgcagcgcccgccgcagcagcagtccgacggccagcgcaccgat
gcgggttcgggtgcggcgcaggcacgtccgtcgtccgaaccggacgacgacattccgccg
ccggaggcacccgactacccggacgatccggggccgatcgactacgaggcttcagcgtcg
acgccgcccgtctccacacccgaggacgaggaagagatgttcaaggaggcggcggaaccc
gccgaccccgcgactcgccgagacccggaagacgtggcgttcgaactgctcaaggacatg
ctcggggccaagaagctcgagggctga
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