Entry |
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Name |
(GenBank) DNA polymerase III subunit gamma and tau
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KO |
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Organism |
rpsk Rhodococcus pseudokoreensis
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Pathway |
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Brite |
KEGG Orthology (KO) [BR:rpsk00001]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
JWS13_22060
03430 Mismatch repair
JWS13_22060
03440 Homologous recombination
JWS13_22060
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:rpsk03032]
JWS13_22060
03400 DNA repair and recombination proteins [BR:rpsk03400]
JWS13_22060
Enzymes [BR:rpsk01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
JWS13_22060
DNA replication proteins [BR:rpsk03032]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
JWS13_22060
DNA repair and recombination proteins [BR:rpsk03400]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
JWS13_22060
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SSDB |
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Motif |
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Other DBs |
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LinkDB |
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Position |
complement(3717827..3720073)
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AA seq |
748 aa
MALYRKYRPASFAEVVGQEHVTEPLSTALDAGRINHAYLFSGPRGCGKTSSARILARSLN
CVEGPTSTPCGQCPSCVALGPGGSGNLDVTELDAASHGGVDDTRELRDRAFYAPAESRYR
VFIVDEAHMVTTAGFNALLKIVEEPPEHLIFIFATTEPEKVLPTIRSRTHHYPFRLLAPT
TMRGLLEKICLQESVPVADPVYPLVIRAGGGSPRDSLSILDQLLAGAGDEGVTYPRALAL
LGVTDVALIDDAVDALATGDGAALFGTVDRVMDAGHDPRRFAVDLLERLRDLILMQAVPD
AAERGLVDAPGDVLENMRAQVQRIGPATLTRYAEVIHAGLGEMRGATAPRLLLEVMCARM
LLPSASDAESAVLQRLERVERGLPPAGSAPVAAAAAAERPAAAPERAPQPPAEPEPEPKF
QRPSMRQAAAATVPPPPEPEPEPMPRPVPEPAPAPVPEPEPTPQPEPTPVPEPTPAPEPT
PQPVPEPEPAPTPVPEPTPEPEPAPAPAPEPEPEPPLAPEVEAAPAASAGPDVATLREAW
NSLREKVSQRNKILPAMLSAATVHDVQGNRLILAHPVPNLGARIASPHNAQVITEVLSEM
FGGTWEVEYQAGAPTAPPPPVAKAAAAPTKPAGAPRFSRPSQERAAQRPPQQQSDGQRTD
AGSGAAQARPSSEPDDDIPPPEAPDYPDDPGPIDYEASASTPPVSTPEDEEEMFKEAAEP
ADPATRRDPEDVAFELLKDMLGAKKLEG |
NT seq |
2247 nt +upstreamnt +downstreamnt
gtggccctgtaccggaagtaccgacccgcatccttcgccgaggtggtggggcaggagcac
gtcaccgaaccactgagcaccgctctcgacgccggacggatcaaccacgcgtatctgttc
tccggtccccgcggctgtggcaagacgtcgtctgcccgcatcctggcccgatcgctgaac
tgcgtggagggcccgacctcgacgccgtgcggccagtgcccctcgtgcgtggcgctcggc
cccggcgggtcgggcaacctcgacgtcaccgaactcgacgcggccagccacggtggcgtc
gacgacacccgtgagctgcgcgaccgcgcgttctacgcgcccgccgagtcgcggtaccgg
gtgttcatcgtggacgaggcccacatggtcaccacggcgggtttcaacgccctcctcaag
atcgtggaggagccgccggagcacctcatcttcatcttcgcgaccaccgaacccgagaag
gtgctgccgaccatccgttcgcgcacccatcactatccgttccggttgctcgcgccgacg
acgatgcgcgggctgctggagaagatctgcctgcaggagagcgtgccggtcgccgacccg
gtgtatccgctggtcatccgcgccggcggtgggtccccgcgtgactcgctgagcatcctc
gaccagctcctcgccggcgccggcgacgagggcgtcacctacccgcgcgcgctcgcgctg
ctcggcgtcaccgacgtcgcgctgatcgacgacgccgtcgacgcgctggccaccggcgac
ggcgccgcgctgttcgggacggtcgaccgcgtcatggacgccgggcacgatccgcgccgc
ttcgccgtcgacctgctcgagcgcctgcgcgacctgatcctgatgcaggcggtccccgac
gccgccgaacgtggcctcgtcgacgctcccggcgacgtgctcgagaacatgcgcgcccag
gtccagcggatcggtcccgccacgctaacccggtacgccgaggtgatccacgccggtctc
ggcgagatgcgcggcgccaccgccccccgactgctgctcgaagtgatgtgcgcccggatg
ctgctgccgtcggcgtccgatgcggagtcggccgtgctgcagcggctcgaacgcgtcgag
cgcggacttccgcccgcaggctccgcaccggtcgccgccgcagccgcagccgagcggccc
gccgcggcaccggagcgcgcgccgcaaccgcccgccgagccggaaccggagccgaagttc
cagcgaccgtcgatgcgccaggccgcggcggccaccgtgcccccgccgcccgagccggaa
cccgaaccgatgccgcggcccgttccggagcccgcgcctgcccccgttcccgaaccggag
ccgacgccgcagcccgaaccgacacccgttccggagccgacgccggcacccgagccgacg
ccgcagcccgtgcccgaaccggagcccgcgcccactcctgtgcccgagccgacgccggaa
cccgagccggcgcctgcacccgcgccggaacccgaaccggagccaccgctcgcgcccgag
gtggaggcggcacccgcagcgtcggcgggtccggatgttgcgaccctgcgggaggcctgg
aattcgctgcgcgagaaggtgagtcagcggaacaaaatccttcccgcgatgttgtcggcc
gccacggtgcacgacgtgcagggcaaccgcctgatcctggcgcacccggtccccaacctg
ggtgcccggatcgcgtcgccgcacaacgcccaggtgatcaccgaggtgctgtccgagatg
ttcggcggcacctgggaagtggagtatcaagctggtgctccgacggcgccgcccccaccg
gtcgcgaaggccgctgcggcgccgacgaagccggcgggtgcaccccggttctcccggccc
agccaggagcgggctgcgcagcgcccgccgcagcagcagtccgacggccagcgcaccgat
gcgggttcgggtgcggcgcaggcacgtccgtcgtccgaaccggacgacgacattccgccg
ccggaggcacccgactacccggacgatccggggccgatcgactacgaggcttcagcgtcg
acgccgcccgtctccacacccgaggacgaggaagagatgttcaaggaggcggcggaaccc
gccgaccccgcgactcgccgagacccggaagacgtggcgttcgaactgctcaaggacatg
ctcggggccaagaagctcgagggctga |