Rhodococcus pseudokoreensis: JWS13_22310
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Entry
JWS13_22310 CDS
T08508
Name
(GenBank) very short patch repair endonuclease
KO
K07458
DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
Organism
rpsk
Rhodococcus pseudokoreensis
Brite
KEGG Orthology (KO) [BR:
rpsk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rpsk03400
]
JWS13_22310
DNA repair and recombination proteins [BR:
rpsk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
JWS13_22310
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Vsr
MTES_1575
DUF559
Motif
Other DBs
NCBI-ProteinID:
QSE91167
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All DBs
Position
3765968..3766369
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AA seq
133 aa
AA seq
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MPATDPATSARMRAQRRRDTAPELALRRELHRRGVRYFVDRAPMKGVRRRADLVFPRRKV
AVYVDGCFWHSCPQHATFPKNNAQWWAEKLAGNVTRDRDTDSTLTDAGWTVVRIWEHENP
VVAADRVQAALRR
NT seq
402 nt
NT seq
+upstream
nt +downstream
nt
atgcccgccaccgaccccgcgaccagcgcccggatgcgggcgcagcggcgtcgcgacacg
gcacccgaactcgcgttgcgccgcgaactgcaccgccgcggggtccggtacttcgtggac
cgggcgccgatgaagggggttcggcggcgcgccgacctggtgtttccgcgacgcaaggtg
gccgtgtacgtggacgggtgtttctggcacagctgcccgcagcacgccacgtttccgaag
aacaacgcgcagtggtgggccgagaagctcgccgggaacgtgacccgcgaccgggacacc
gactcgacgctgaccgacgccgggtggacggtggtgcggatctgggagcacgagaatccg
gtggtcgctgcggaccgggttcaggccgccctgcgtcgctga
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