Rhodococcus pseudokoreensis: JWS13_25025
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Entry
JWS13_25025 CDS
T08508
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
rpsk
Rhodococcus pseudokoreensis
Brite
KEGG Orthology (KO) [BR:
rpsk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rpsk03032
]
JWS13_25025 (gyrA)
03400 DNA repair and recombination proteins [BR:
rpsk03400
]
JWS13_25025 (gyrA)
Enzymes [BR:
rpsk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
JWS13_25025 (gyrA)
DNA replication proteins [BR:
rpsk03032
]
Prokaryotic type
DNA Topoisomerases
JWS13_25025 (gyrA)
DNA repair and recombination proteins [BR:
rpsk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
JWS13_25025 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
QSE91664
LinkDB
All DBs
Position
complement(4315120..4317642)
Genome browser
AA seq
840 aa
AA seq
DB search
MTDTTLPPEGPGHDRIEPVDIQQEMQSSYIDYAMSVIVGRALPDVRDGLKPVHRRVLYAM
YDNGYRPDRGYVKSARPVAETMGNYHPHGDSSIYDTLVRMAQPWSLRYPLVDGQGNFGSR
GNDGAAAMRYTECRLTPLAMEMLREIDHETVDFTPNYDGRTQEPSVLPSRIPNLLINGSG
GIAVGMATNIPPHNLREVAEAIYWALENWEADEESTLTAVMERVKGPDFPTHGLIVGGQG
IHDAYTTGRGSVRMRGVVEIEEDAKGRTTIVITELPYQVNPDNLITSIAEQVRDAKIAGI
SDIHDESSDRAGMRIVVTVKRDAVAKVVLNNLYKHTQLQTSFGCNMLSIVDGVPRTLRLD
QMIRLYVAHQVEVIRRRTEYLLRKAEERAHILRGLVKALDALDEVIALIRASQTVDIARA
GLIELLTVDEIQADAILAMQLRRLAALERQKIIDELAEIEREIADLKDILEKPERQRRIV
RDELKEIVDKHGDDRRTRIIAADGDVADEDLIAREDVVVTITETGYAKRTKTDLYRSQKR
GGKGVQGAGLKQDDIVSHFFVSSTHDWLLFFTTKGRVYRAKAYELPEASRTARGQHVANL
LAFQPDERIQSVIQIKTYEDAPYLVLATRNGLVKKSKLTDFDSNRSGGIVAINLRGEDEL
VGAVLCSSDDDLLLVSAQGQSIRFSATDEALRPMGRATSGVQGMRFNGDDELLSLNVVRE
GTYLLVATSGGYSKRTGMEDYPVQGRGGKGVLTIQYDKKRGTLVGALIVNDDDELYAITS
GGGVIRTAAKQVRKAGRQTKGVRLMNLGEGDTLLAIARNADEPDETDDNAESSGKGAKES
NT seq
2523 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacacaacgttgccgccggagggaccggggcacgaccgcatcgagcccgtcgac
attcagcaggagatgcagagcagctacatcgattacgcgatgagcgtgatcgtgggtcgt
gcgctgcccgacgtgcgggacggcctcaagccggtgcaccgccgcgttctgtacgcgatg
tacgacaacggttaccggcccgatcgcggttatgtgaagtctgcgcgaccggtcgccgag
acgatgggtaactaccacccccacggcgactcctcgatctacgacacgctcgtccgcatg
gcccagccgtggtcgctgcggtacccgctcgtcgacggccagggcaacttcggttcccgc
ggcaacgacggcgccgccgcgatgcggtacaccgagtgccggctgactccgctggccatg
gaaatgctccgggagatcgaccacgagacggtcgacttcaccccgaactacgacggtcgt
acacaggaaccgtcagttctccccagccgtatccccaacctgttgatcaatggttccggc
ggcatcgccgtcggtatggccaccaacatcccgccgcacaacctgcgtgaggtcgccgag
gccatctactgggccctggagaactgggaagccgacgaggagtccaccctcaccgcggtc
atggaacgcgtgaagggccccgacttcccgacgcacggcctgatcgtcggcggccagggc
atccacgacgcctacaccaccggccgcggctcggtccgcatgcgcggtgtcgtggagatc
gaggaggacgccaaggggcgcaccacgatcgtcatcaccgaactgccgtaccaggtgaac
ccggacaacctgatcacgtcgatcgccgagcaggtgcgcgacgcgaagatcgccggcatc
tccgacatccacgacgagtcctcggaccgtgcgggtatgcgcatcgtcgtcaccgtcaag
cgtgacgcggtcgcgaaggtcgtgctcaacaacctgtacaagcacacccagctgcagacc
agcttcggctgcaacatgctgtccatcgtcgacggcgtgccgcgcaccctgcgcctcgac
cagatgatccgcctgtacgtcgcccaccaggtcgaggtcatccgcaggcgcaccgagtac
ctgctccgcaaggccgaggaacgcgctcacatcctgcgcggactggtgaaggccctcgac
gccctcgacgaggtcatcgcgctgatccgcgcgtcgcagaccgtggacatcgcgcgggca
ggcctgatcgagctgctcaccgtcgacgagatccaggccgacgcgatcctcgcgatgcag
ctgcgtcgtctcgccgccctcgagcgtcagaagatcatcgacgaactcgccgagatcgag
cgggagatcgccgacctcaaggacatcctcgagaagcccgagcgtcagcgccgcatcgtc
cgggacgagctgaaggagatcgtcgacaagcacggcgacgaccgccggacccgcatcatc
gcggccgacggcgacgtggccgacgaggatctgatcgcccgcgaggacgtcgtcgtcacg
atcaccgagaccggctacgccaagcgcaccaagaccgacctgtaccgctcgcagaagcgc
ggcggcaagggtgtgcagggtgccgggctgaagcaggacgacatcgtctcgcacttcttc
gtcagctccacccacgactggctgctgttcttcaccacgaagggccgcgtgtaccgggcc
aaggcgtacgagctgccggaggcgagccgcacggcccgcggacagcacgtggccaacctg
ctggcgttccagcccgacgagcgcatccagagcgtcatccagatcaagacgtacgaggac
gcgccctacctggttctcgccacccgcaacggtctggtcaagaagtccaagctcaccgac
ttcgactcgaaccgcagcggcggcatcgtcgcgatcaacctgcgcggcgaggacgaactg
gtcggcgcggtcctctgctcctccgacgacgatctgctgctcgtctccgcgcagggacag
tcgatccgcttctccgccaccgacgaggcgctgcgcccgatgggacgcgccacgtccggc
gtccagggaatgcggttcaacggcgacgacgaactgctgtcgctcaacgtggtgcgcgag
gggacctacctgctggtggcgacgtcgggcggctactcgaagcgcaccggcatggaggac
tacccggtccagggtcgcggcggaaagggtgtactcacgattcaatacgacaagaaacgt
ggcaccctggtcggagcgctcatcgtgaacgacgacgacgagctctacgcgatcacgtcg
ggcggtggcgtcatccgcaccgccgccaagcaggtccgcaaggcgggtcggcagaccaag
ggtgttcgtttgatgaacctcggggaaggcgacaccctgctcgcgatcgcgcgcaatgcc
gacgaacccgacgagaccgacgacaacgccgagagcagcggcaaaggagctaaggagtcc
tag
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