Rhodococcus pseudokoreensis: JWS13_28560
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Entry
JWS13_28560 CDS
T08508
Symbol
clpB
Name
(GenBank) ATP-dependent chaperone ClpB
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
rpsk
Rhodococcus pseudokoreensis
Brite
KEGG Orthology (KO) [BR:
rpsk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
rpsk03110
]
JWS13_28560 (clpB)
Chaperones and folding catalysts [BR:
rpsk03110
]
Heat shock proteins
HSP100
JWS13_28560 (clpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
Clp_N
ClpB_D2-small
AAA
AAA_5
AAA_22
AAA_16
Sigma54_activat
ATPase_2
nSTAND3
IstB_IS21
Zeta_toxin
NACHT
AAA_14
AAA_24
bpMoxR
AAA_18
NBD_SMAX1
AAA_7
TniB
RNA_helicase
AAA_28
AAA_19
T2SSE
ABC_tran
DNA_pol3_delta2
SHE3
Prefoldin
DUF815
Torsin
HAUS-augmin3
AAA_25
OVT1
ABC_tran_CTD
Motif
Other DBs
NCBI-ProteinID:
QSE92293
UniProt:
A0A974W6R8
LinkDB
All DBs
Position
complement(5115419..5118052)
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AA seq
877 aa
AA seq
DB search
MDTGSLTEKSREALQEAQNVATRMGHTEVDGEHLLLALVDQQEGLVPRLLEQAGANVDAL
RSDLERELSRRPKVSGPGATPGQVMITQRLAKLLDAAEREAKRLKDSYVSVEHLVMALSE
EGSASAAGRVLASHGVTREAFLTALTKVRGNQRVTSATPEGAYEALEKYGRDLVSEGRAG
KLDPVIGRDAEIRRVTQILSRKTKNNPVLIGDPGVGKTAIVEGLAQRIVRGDVPEGLRDK
TIFSLDMGSLVAGAKYRGEFEERLQAVLSEVKAAEGHILLFVDELHTVVGAGSVGGEGSL
DAGNMLKPMLARGELHMIGATTLDEYRKHIESDAALERRFQTVLVDEPSAEDAISILRGL
RERLEVFHGVKIQDGALVAAVTLSHRYITDRFLPDKAIDLVDEACARLRTEIDSMPAELD
ELTRKVTRLEIEEAALSKETDAASKTRLDELRKELADLRAEADARHAQWEAERQAIRRVQ
ELRGELERLRHEAEEAERNYDLNRAAELRYGEITELERRLAAAEEQLATRQGQNPLLREV
VTEDEIAEIVAAWTGIPVARLQEGEREKLLKLDEILHERVVGQDEAVQLVADAVIRARSG
IRDPRRPIGSFIFLGPTGVGKTELAKTLASALFDSEDNMVRLDMSEYQERHTVSRLIGAP
PGYVGYDEGGQLTEAVRRKPYSVVLFDEIEKAHADVFNTLLQVLDDGRITDSQGRQVDFR
NTVIIMTSNIGSQHLLDGVTADGEIKPDARERVLAELRGHFRPEFLNRVDDIVLFTPLTL
PQIEHIVELQLTDLRNRLSERQIHLDITPEARRLIAEHGFDPVYGARPLRRYIAHEVETK
IGRALLRGEIEPGGTIAVTVDGGELAVAYAEPAVAAA
NT seq
2634 nt
NT seq
+upstream
nt +downstream
nt
atggacaccggcagcctgactgaaaagtcacgagaagccctgcaggaagcccagaacgtc
gcgaccagaatgggtcacaccgaggtcgacggagagcacctgctgctcgcgttggtcgat
cagcaggaagggttggtcccccgactgcttgagcaggccggcgcgaacgtcgatgccctg
cgatccgacctggaacgtgaactgtcgcgcaggccgaaggtcagcggccccggcgcgacg
cccggtcaggtgatgatcacccagcgtttggccaagctgctcgacgccgcggagcgggag
gcgaagcgactcaaggattcctacgtgtcggtggagcatctcgtgatggccctctccgag
gaggggtcggccagtgcggcggggcgggtcctcgccagtcatggggtcacacgagaggcc
ttcctcacggcgctgacgaaagtgcgcggcaatcaacgcgtcacctcggcgaccccggag
ggggcgtacgaggctctggagaagtacggacgcgacctcgtctccgagggtcgggcaggc
aaactcgatccggtcatcggccgagatgccgagatccgcagggtaacgcagatcctgagc
cggaagacgaagaacaatccggtgctgatcggcgaccccggcgtcggcaagaccgcgatc
gtcgagggcctcgcccagcggatcgtccgcggcgacgtgcccgagggcctgcgcgacaag
acgatcttctcgctcgacatgggttccctggtggccggcgcgaagtaccgcggcgagttc
gaggagcgactgcaggcggtgctgtccgaggtaaaggcggccgaggggcacatcctgttg
ttcgtcgacgagttacacacagtggtcggtgcgggatcagtcggcggcgagggatctctc
gacgccggcaacatgctcaagccgatgctcgcccgcggcgaactgcacatgatcggtgcc
accactctcgacgagtatcgcaagcacatcgaatccgatgccgcactggagcgtcgcttc
cagaccgttctcgtcgacgagcccagcgccgaggatgcgatctcgattctgcgcggactt
cgagaacgcctcgaggtgtttcacggcgtgaagattcaggacggcgcactggtggccgcc
gtgaccctctcgcaccggtacatcaccgaccgcttccttccggacaaggcgatcgatctg
gtggacgaggcgtgtgcccggctacgcaccgaaatcgattcgatgcccgccgaactcgac
gagctcacccggaaggtgacccggctggagatcgaagaggccgcgctgtccaaggaaacg
gacgcggccagcaagacgcgcctcgacgagctgcgtaaggagctggccgatctacgggcc
gaggccgacgcccggcacgctcagtgggaggcggagcggcaggcgatccggcgggtgcag
gagctgcggggagagctggaacgattgcgccacgaggccgaggaggcggagcgtaactac
gacctcaatcgggccgccgagttgcgatacggcgagatcaccgagttggaacgcaggctc
gcggcggcggaggagcaactggccaccaggcagggacagaatccgttgctgcgtgaagtg
gtcaccgaagacgagatcgcagagatcgtggccgcatggacgggtatcccggtcgcccgg
ctgcaggaaggcgagcgggagaagctgttgaagctcgacgagattctgcacgagagggtc
gtcggtcaggacgaggccgtgcaactggtcgcagacgcggtgatccgggcgaggtccggt
atccgtgatccgcgccggccgatcggttcgttcatcttcctgggcccgacgggcgtggga
aagaccgagctcgcaaagacgctggccagtgccctcttcgacagcgaagacaacatggtg
cgcctggacatgagcgaataccaggagcggcacacggtgagcaggctcatcggtgcgccc
cccgggtacgtcgggtacgacgagggcggccagctcaccgaggcggtacgccgcaagccg
tactccgtggtgctcttcgacgagatcgagaaggcccacgccgacgtcttcaataccctg
ctgcaggtgctcgatgatggccggatcaccgattctcaggggagacaagtcgatttccgg
aacacggtgatcatcatgacctccaacatcggatcccagcatctcctcgacggagtcaca
gccgacggcgagatcaagccggacgcccgggagcgggtgctggcggagctgcgcgggcac
ttccgtcccgagttcctcaaccgggtcgatgacatcgtgttgttcactccgctcacgctg
ccccagatcgagcacatcgtcgagctgcagctcaccgatcttcggaacaggttgtcggag
cgccagatacacctggatatcaccccggaagcacgccggctcatcgccgaacacggtttc
gacccggtctacggtgcgcggccgctacggcggtacatcgcccacgaggtcgaaacgaag
atcggtcgcgcgctgttgcgcggcgagatcgaaccaggtggcaccatcgctgtcacggtg
gacggcggcgagctcgccgtcgcgtacgccgaacccgccgtcgcggcggcctga
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