Rhodococcus pseudokoreensis: JWS13_29275
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Entry
JWS13_29275 CDS
T08508
Symbol
gcvP
Name
(GenBank) aminomethyl-transferring glycine dehydrogenase
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
rpsk
Rhodococcus pseudokoreensis
Pathway
rpsk00260
Glycine, serine and threonine metabolism
rpsk00630
Glyoxylate and dicarboxylate metabolism
rpsk00670
One carbon pool by folate
rpsk00785
Lipoic acid metabolism
rpsk01100
Metabolic pathways
rpsk01110
Biosynthesis of secondary metabolites
rpsk01200
Carbon metabolism
Module
rpsk_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
rpsk00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
JWS13_29275 (gcvP)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
JWS13_29275 (gcvP)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
JWS13_29275 (gcvP)
00670 One carbon pool by folate
JWS13_29275 (gcvP)
Enzymes [BR:
rpsk01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
JWS13_29275 (gcvP)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
GDC-P
GcvP2_C
Aminotran_5
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
QSE92413
LinkDB
All DBs
Position
complement(5277150..5280062)
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AA seq
970 aa
AA seq
DB search
MSVESRHAHRSAPLTSDFPSRHIGPDASASQRMLGALGYDTLDQLIDAAVPDQIRSAEAM
DLPVARSEQQVLSDLRTLSERNETRVQMIGLGYYDTITPAVLRRNMLESPAWYTAYTPYQ
PEISQGRLEALLTFQTVIEDLTALPLAGASLLDEATAVMEAVLLMRRANKAKSGTPRVVV
DADCLPQTLAVVRGRAKSVGIDVEVADLTGGLPDGDLFGVVFQAPGASGHVRDLAPLIAA
AQERGALTTVAADLLSLTLLTPPGEQGADIAVGSAQRFGVPLFFGGPHAGYMAVRGGLER
MLPGRLVGVSVDVDGKTAYRLALQTREQHIRRDKATSNICTAQALLANVAAMYAAYHGPE
GLRAIATRVHGHATAVAGGLRTAGHSVVHDSFFDTVLVHVPAGARDVVDRADRAGINLRL
VDADHVAIACDECTTDEIVDRVLSAFGARVEKATVSALPQSLLRTSNYLQHNVFHEHRSE
TAMLRFLRALSDKDLALDRTMIPLGSCTMKLNSAVEMEPISWPGFASIHPYAPVEQTSGY
LQLIRGLERWLGEITGYDRVSLQPNAGSQGELAGLLAINGYHESLGDHGRDICLIPQSAH
GTNAASAVLAGMRVVVVATASNGNIDLGDLRAKIAAHEGKIAAIMLTYPSTHGVYENDVR
TVCDLVHEAGGQVYVDGANLNALVGLAQPGKFGGDVSHLNLHKTFCIPHGGGGPGVGPVA
VRKHLAPFLPGNPLGGDQLGTPVSAANYGSAGILPITWAYIALMGPDGLTEATKSAVLAA
NYVAKSLDAHFPVLYTGPSGLVAHECILDLRPVTKATGVTAEDVAKRLIDYGFHAPTLSF
PVSGTLMVEPTESEDLAELDRFIEAMISIRREIDLVGEGVWPLERSPLRQAPHTADQVTA
DNWDLPYPRHLAAFPVASLRAGKYWPPVRRIDGVHGDRNLVCSCPAPEAFENTTDINSPA
FAETPEEAFA
NT seq
2913 nt
NT seq
+upstream
nt +downstream
nt
gtgtcagtcgaatcccgtcacgcgcatcgcagcgcgcccctcaccagcgattttccgtca
cgccacatcggccccgacgcttccgccagccagcgcatgctcggcgctctcggttacgac
acgctcgatcagctcatcgatgccgcggtgcctgaccagatccgcagcgcggaggccatg
gacctgccggtggcgcggtccgagcagcaggtgctctccgacctgcggacgctgtcggag
cgcaacgagacccgcgtccagatgatcggcctcgggtactacgacaccatcacgcccgcg
gttctgcgccgcaacatgctcgagtcgccggcctggtacaccgcgtacacgccgtaccag
ccggagatttcccagggcaggctcgaggcgctgctgacgttccagacggtcatcgaagac
ctcacggccctccccctcgccggtgcgtccctgctggacgaggccaccgcggtgatggag
gcggtgctgctgatgcggcgcgcgaacaaggcgaagtcggggacgccccgcgtggtcgtc
gacgcggactgtctgccgcagaccctcgcggtggtgcgcggccgagccaagtcggtgggc
atcgacgtcgaggtggcggacctgaccggcggactcccggacggtgacctgttcggcgtc
gtgttccaggcgcccggcgccagcgggcacgtgcgcgatctggccccgctcatcgccgcc
gcccaggagcgcggtgccctgaccacggtcgccgccgatctgctgtcgctgacgctgctg
acgccgcccggtgagcagggtgccgacatcgcggtgggatccgcgcagcgtttcggtgtg
ccgctgttcttcggtgggccgcacgccggttacatggccgtgcgcggcgggctcgagcgc
atgctccccggccggctcgtcggcgtgtccgtcgacgtcgacgggaagaccgcctaccgg
ctggcactgcagacccgcgagcagcacatccggcgcgacaaggcgaccagcaacatctgc
accgcgcaggcactgctcgcgaacgtcgccgccatgtacgccgcctatcacggtccggaa
gggctgcgcgccatcgcgactcgagtccacggacatgcgacggccgtcgcgggcggcctc
cgcacggcgggacactcggtggtccacgacagcttcttcgacaccgtgctggtgcacgtt
ccggccggggcccgcgacgtcgtcgaccgcgccgaccgcgccggcatcaacctgaggctg
gtcgacgcggaccacgtcgcgatcgcctgcgacgagtgcaccaccgacgagatcgtcgac
cgcgtcctgtccgcgttcggcgcgcgagtcgagaaggcaacggtctccgcgctgccgcag
tcactgctgcgcacgtcgaactacctgcagcacaacgtgttccacgagcaccggtccgag
acggcgatgctccgcttcctgcgcgcgctgtcggacaaggacctcgcactggaccgcacc
atgatcccgctcggctcgtgcacgatgaagctcaactccgccgtggagatggagccgatc
agctggcccgggttcgcctccatccacccgtacgccccggtcgaacagaccagcggctac
ctgcagctcatccgcggcctcgagcggtggctcggtgagatcaccggatacgaccgggtg
tcgttgcagcccaacgccggatcgcagggcgagctggccggactgctggccatcaacggc
taccacgagagcctcggtgaccacggacgcgacatctgcctcatcccgcagtccgcacac
ggcaccaacgccgcgtccgcggtgctcgccggcatgcgggtggtggtggtcgcgacggcg
tccaacggcaacatcgacttaggcgacctgcgcgcgaagatcgcggcacacgaaggcaag
atcgccgcgatcatgctcacctatccgtccacccacggcgtgtacgagaacgacgtgcgg
acggtgtgcgatctcgtgcacgaggccggcggccaggtgtacgtcgacggcgccaacctc
aacgcgctcgtcggcctggcccagcccgggaagttcggcggcgacgtgtcgcacctgaac
ctgcacaagacgttctgcatcccgcacggcggcggcggccccggcgtcggaccggtcgcg
gtgcgcaagcatctggcgccgttcctgcccggcaacccgctcggcggagaccaactcggc
actccggtatcggcggccaactacggctccgccggcatcctgcccatcacgtgggcgtac
atcgcgctgatgggcccggacggactgacggaggccaccaagtccgccgtgctggccgcc
aactacgtcgcgaagtcgctcgacgcgcacttccccgtcctgtacacgggaccgtcgggt
ctggtggcgcacgagtgcatcctggacctgcgtccggtcacgaaggcgaccggcgtgacc
gccgaggacgtggcaaagcggttgatcgactacggtttccacgctcccaccctgtcgttc
cccgtcagcggcacgctgatggtggagcccaccgaatccgaggatctggccgaactcgac
cgcttcatcgaggcaatgatctcgatccgccgcgaaatcgacctggtcggcgagggtgtg
tggccgctcgaacgcagcccgctgcgtcaggccccgcacaccgcggatcaggtcaccgcc
gacaactgggatctgccctatccgcggcacctggccgccttcccggtcgcgtcgctgcgt
gccggcaagtactggccgccggttcgccgcatcgacggcgtccacggcgaccgcaacctc
gtgtgctcgtgccccgcgcccgaggccttcgagaacaccaccgacatcaattccccggcc
ttcgccgagacccccgaggaggccttcgcatga
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