Rhodococcus pseudokoreensis: JWS13_29285
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Entry
JWS13_29285 CDS
T08508
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
rpsk
Rhodococcus pseudokoreensis
Pathway
rpsk00010
Glycolysis / Gluconeogenesis
rpsk00020
Citrate cycle (TCA cycle)
rpsk00260
Glycine, serine and threonine metabolism
rpsk00280
Valine, leucine and isoleucine degradation
rpsk00310
Lysine degradation
rpsk00380
Tryptophan metabolism
rpsk00620
Pyruvate metabolism
rpsk00630
Glyoxylate and dicarboxylate metabolism
rpsk00640
Propanoate metabolism
rpsk00670
One carbon pool by folate
rpsk00785
Lipoic acid metabolism
rpsk01100
Metabolic pathways
rpsk01110
Biosynthesis of secondary metabolites
rpsk01120
Microbial metabolism in diverse environments
rpsk01200
Carbon metabolism
rpsk01210
2-Oxocarboxylic acid metabolism
rpsk01240
Biosynthesis of cofactors
Module
rpsk_M00009
Citrate cycle (TCA cycle, Krebs cycle)
rpsk_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
rpsk_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
rpsk_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
rpsk00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
JWS13_29285 (lpdA)
00020 Citrate cycle (TCA cycle)
JWS13_29285 (lpdA)
00620 Pyruvate metabolism
JWS13_29285 (lpdA)
00630 Glyoxylate and dicarboxylate metabolism
JWS13_29285 (lpdA)
00640 Propanoate metabolism
JWS13_29285 (lpdA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
JWS13_29285 (lpdA)
00280 Valine, leucine and isoleucine degradation
JWS13_29285 (lpdA)
00310 Lysine degradation
JWS13_29285 (lpdA)
00380 Tryptophan metabolism
JWS13_29285 (lpdA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
JWS13_29285 (lpdA)
00670 One carbon pool by folate
JWS13_29285 (lpdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rpsk04147
]
JWS13_29285 (lpdA)
Enzymes [BR:
rpsk01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
JWS13_29285 (lpdA)
Exosome [BR:
rpsk04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
JWS13_29285 (lpdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
Pyr_redox_3
FAD_oxidored
HI0933_like
AlaDh_PNT_C
3HCDH_N
FAD_binding_2
GIDA
Amino_oxidase
NAD_binding_8
DAO
Lycopene_cycl
2-Hacid_dh_C
NAD_binding_9
DUF7427
Motif
Other DBs
NCBI-ProteinID:
QSE92415
LinkDB
All DBs
Position
5281619..5282989
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AA seq
456 aa
AA seq
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MSRSADVVILGGGSGGYAAAIRSAELGRSVILIEENELGGTCLHQGCIPTKALLHSAEVA
DNARTAAQFGVDVTFGGVDLEKVLSYQNTIVTRLHKGLQGLVDSHGITVVNGRGRLVGPN
GIEVDGELITGAAVVLATGSSPKTLPGISIGGRVVTSDQALVLPTVPKKAIILGGGVIGV
EFASVWASFGASVTIVEAMPRLVPNEDETVSKYLERAFRRRKIAAKTGVRVTEVAQDEDA
VTVTLDSGDVLDADVVLVAVGRGPNTASMGYEETGVVLDRGFVVTSDRLRTTVPNVYAVG
DIVPGLQLAHRGFQQGIFVAEEIAGLRPDVIDETGIPRVTYSHPEVASVGLTETAAREKF
GEDIRTVVYDLAGNGKSQILKTSGAVKLVVAPDGVVVGVHMVGDRVGELIGEAQLLYNFE
VDAAQAAKFVHAHPTQGEALGEALLAVAGKPLHVHA
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgatctgcagatgtcgtcatcctcggtggcggttccggcggctacgcggccgcg
atccgctcggccgaactgggccgttcggtcattctgatagaagagaacgaactcggcggc
acctgcctgcaccaggggtgcatcccgaccaaggcgctgctgcattccgccgaggtcgcc
gacaatgcccgcacggccgcacagttcggggtcgacgtcacgttcggcggcgtcgacctc
gagaaggtgctgagctaccagaacaccatcgtcacccgcctgcacaagggcctgcagggc
ctcgtcgactcccacggcatcaccgtcgtcaacggccgcgggcggctggtggggcccaac
ggtatcgaggtcgacggcgagctgatcaccggtgcggccgtcgttctggcgacgggctcg
tccccgaagacgttgccgggcatcagcatcggcggcagggtcgtcaccagcgaccaggcg
ctggtgctgccgacggtgccgaagaaggcgatcatcctcggcggcggcgtcatcggcgtc
gaattcgccagtgtgtgggcgtcgttcggtgcgtcggtgacgatcgtcgaggcgatgccg
aggctggtcccgaacgaggacgagacggtctccaagtacctcgagcgggcgttccgtcgc
cgcaagatcgccgcgaagaccggggtacgggtcaccgaggtggcgcaggacgaggacgcg
gtgaccgtcaccctcgactccggcgacgtgctcgacgccgacgtcgtgctggtcgcggtg
ggacgcggcccgaacaccgcctcgatgggatacgaggagaccggcgtggtcctcgaccgg
ggattcgtggtcaccagcgaccggctgcgtaccaccgtgccgaacgtctacgcggtcggc
gacatcgtgcccggactccagctcgcgcaccgcggcttccagcagggcatcttcgtggcg
gaggagatcgccgggctccgtccggacgtcatcgacgagaccggcattccccgcgtcacg
tactcccaccccgaggtcgcgtcggtcgggttgaccgagaccgcggcgcgggagaagttc
ggcgaagacatccggacggtcgtctacgacctagccggcaacggcaagagtcagatcctc
aagacgtcgggggcggtcaaactcgtcgtggcgccggacggcgtcgtggtcggcgtgcac
atggtcggcgaccgcgtcggcgaactgatcggcgaggcacagctgctgtacaacttcgag
gtcgacgccgcccaggccgcgaagttcgtgcacgcccaccccacccagggcgaggccctc
ggcgaggcactgctggcggtggcaggcaaacctctccacgtgcacgcctag
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