KEGG   Rhodococcus pseudokoreensis: JWS13_33920
Entry
JWS13_33920       CDS       T08508                                 
Name
(GenBank) AMP-binding protein
  KO
K01897  long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
Organism
rpsk  Rhodococcus pseudokoreensis
Pathway
rpsk00061  Fatty acid biosynthesis
rpsk00071  Fatty acid degradation
rpsk01100  Metabolic pathways
rpsk01212  Fatty acid metabolism
rpsk02024  Quorum sensing
rpsk04146  Peroxisome
Module
rpsk_M00086  beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:rpsk00001]
 09100 Metabolism
  09103 Lipid metabolism
   00061 Fatty acid biosynthesis
    JWS13_33920
   00071 Fatty acid degradation
    JWS13_33920
 09140 Cellular Processes
  09141 Transport and catabolism
   04146 Peroxisome
    JWS13_33920
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    JWS13_33920
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01004 Lipid biosynthesis proteins [BR:rpsk01004]
    JWS13_33920
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rpsk04147]
    JWS13_33920
Enzymes [BR:rpsk01000]
 6. Ligases
  6.2  Forming carbon-sulfur bonds
   6.2.1  Acid-thiol ligases
    6.2.1.3  long-chain-fatty-acid---CoA ligase
     JWS13_33920
Lipid biosynthesis proteins [BR:rpsk01004]
 Acyl-CoA ligase
  Long/very long chain acyl-CoA ligase
   JWS13_33920
Exosome [BR:rpsk04147]
 Exosomal proteins
  Exosomal proteins of breast milk
   JWS13_33920
  Exosomal proteins of breast cancer cells
   JWS13_33920
SSDB
Motif
Pfam: AMP-binding AMP-binding_C
Other DBs
NCBI-ProteinID: QSE93236
LinkDB
Position
6303996..6305645
AA seq 549 aa
MNNPAPALHYPELTMAAFPPGMALLYGDRPAVVDGDAVCTYRELDERSGAFAAALRDAGV
TERDVVLLHLGNCIEFVVAYYGALRAGATVTLVNPLQPGPGLRSQILDTAAVAAVTQPGQ
LDTLTEAASGTTVRTIVVAGLPAGAGRGQFGFEEFVRGYATAPFTPAVSGDDVAHLAYTG
GTTGLSKGVRVLHRNVLANVTQMIAWRAGHEVRATADGGIELRPIESLGDRGVVPGAGAT
VVVSPLFHAHALINMSFLLLCGATQVFAGRFEPGGMLELIETNRATYITGSPAMWHAVAT
HPDAATRDTDSVRVVSSGAAPIDHVTLEALGRAFPAASVVEGYGLTEGTCLVASAPLTGS
VAYKLGSVGLPVFDTEVQIRAQDDSGAVLDAGARGKLWVRGPQVTDGYLNHPEITAQQFV
DGWLDTGDIAYLDEDGYLFICDRTKDMLIYKGYNVYPRELEEILVSHPDVSSAAVVGREA
GSVGQEPVAFVVPMPGATIDGDALSAFVAERVLPYKKVRDVVVVEQLPTSAAGKILKTKL
REQLATAAT
NT seq 1650 nt   +upstreamnt  +downstreamnt
gtgaacaatcccgcaccggcactgcactatccggaactgacgatggcggcgttcccgccc
ggcatggcactcctgtacggcgaccggcccgcggtggtcgacggcgacgccgtgtgcacc
taccgcgaactcgacgagcggtcgggagcgttcgccgccgcgctgcgggatgcgggggtg
accgagcgcgacgtggtgctcctgcacctcggcaactgcatcgagttcgtcgtggcctac
tacggcgcgctgcgggcaggggcgaccgtcaccctggtcaacccgctgcagcccggcccc
ggactgcgctcgcagatcctcgacaccgctgcggtcgccgccgtcacccagcccgggcag
ctggacaccctcaccgaggcggcgagcggcaccaccgtccgcaccatcgtggtggccggc
ctcccggcgggcgccggtcgcggtcagttcgggttcgaggaattcgtccgcgggtacgcc
accgcgccgttcaccccggcggtgtccggggacgacgtcgcccacctcgcctacaccggc
ggcaccaccgggttgtccaagggcgtgcgggtactgcaccgcaacgttctcgccaacgtg
acccagatgatcgcgtggcgggcgggccacgaggtgcgggccaccgccgacggcggaatc
gaactgcgtcccatcgagagtctcggcgaccgcggtgtggtgcccggggccggcgcgacc
gtcgtcgtgtcgccgctgttccacgcgcacgcgctgatcaacatgtcgttcctgctgctg
tgcggggcgacgcaggtgttcgccggacgcttcgagcccggcgggatgctggagttgatc
gagacgaaccgcgccacgtacatcaccgggagcccggcgatgtggcacgccgtcgccacg
catcccgacgccgccacccgggacaccgattcggtgcgggtggtctcctcgggtgccgca
ccgatcgaccacgtgaccctcgaggcgctggggcgggcgttcccggcggcgagcgtggtc
gagggatacgggctgacggagggaacctgcctggtcgcctccgcgccgctgaccggctcc
gtcgcctacaagctcggcagtgtggggttgccggtcttcgacaccgaggtgcagatccgc
gcccaggacgactccggtgccgtactggacgccggcgcccgcggcaagctgtgggtccgg
ggaccgcaggtcacggacggttacctgaaccatccggagatcacggcgcagcagttcgtc
gacggctggctcgacaccggcgacatcgcctacctcgacgaggacgggtacctgttcatc
tgcgaccgcaccaaggacatgctgatctacaagggctacaacgtgtatccgcgtgagctc
gaggagatcctggtctcgcacccggacgtgtcctccgccgccgtcgtcggccgggaggcg
ggcagcgtcggccaggaaccggtggcgttcgtggtgccgatgcccggcgcgacgatcgac
ggggatgcgttgtccgcgttcgtcgccgagcgggtgctgccgtacaagaaggtacgcgac
gtggtggtggtcgagcagttgccgacctcggcggccgggaagatcctgaagacgaagctg
cgcgagcaactcgcgaccgcggcgacgtag

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