Rhodococcus pseudokoreensis: JWS13_40930
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Entry
JWS13_40930 CDS
T08508
Symbol
glgX
Name
(GenBank) glycogen debranching protein GlgX
KO
K01214
isoamylase [EC:
3.2.1.68
]
Organism
rpsk
Rhodococcus pseudokoreensis
Pathway
rpsk00500
Starch and sucrose metabolism
rpsk01100
Metabolic pathways
rpsk01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
rpsk00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
JWS13_40930 (glgX)
Enzymes [BR:
rpsk01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.68 isoamylase
JWS13_40930 (glgX)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
CBM_48
Alpha-amylase
Isoamylase_C
Motif
Other DBs
NCBI-ProteinID:
QSE94526
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Position
complement(7813916..7816180)
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AA seq
754 aa
AA seq
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MEASESTGTTPIPVWPGSAYPLGATYDGAGTNFSLFSEVAEAVDLCLIAKDGTETRVRLD
EVDGYVWHAYLPTVVPGQRYGYRIHGPWDPSAGHRCDPSKLLLDPYGKAFDGEFDGDRSL
FSYDIDAPASEDAGDDDAGDTVLIVDTDDDLEAEDAGDALEAEAEDDSAPGLPGHDSLGH
TMTTVVINPFFDWAADRAPKHPYHDTVIYEAHVKGMTATYPGVPEELRGTYAGLAHPVII
DHLVDLGVTAIELMPVHQFMHDQTLLDKGLRNYWGYNTFGFLAPHTGYSSAEKPGAAVSE
FKAMVRSFHEAGIEVILDVVYNHTAEGNHLGPTISFRGIDNAAYYRLVDGDAEHYMDYTG
TGNSLNARHPHTLQLIMDSLRYWVTEMHVDGFRFDLASTLARELHDVDRLSAFFDLVQQD
PIVSQVKLIAEPWDIGEGGYQVGNFPGLWTEWNGKYRDTVRDYWRGEPATLGEFASRLTG
SSDLYEATGRRPGASINFVIAHDGFTLHDLVSYNEKHNEANGEDNNDGESHNRSWNCGVE
GPTDDPEIHDLRGRQSRNILATLLLSQGTPMLAHGDEMGRTQQGNNNVYCQDSELSWMDW
SLADTNADLVEFTKRVIALRMKNPVFRRRRFFEGTPIRSGDQTRDIAWLTPSGEEMTPED
WDSGFGKSLAVFLNGEGIPEPNHRGERVVGDSFLLCFNAHDEEIEFSTPNSDYADEWAVV
LDTAVPTGAKDAVIKAGNSLQVESRSLVVLRRTA
NT seq
2265 nt
NT seq
+upstream
nt +downstream
nt
atggaagcgagcgagtcgaccggcaccacgcccattcccgtgtggcccggcagcgcctac
cccctgggcgccacctacgacggggccgggacgaacttctccttgttttccgaggtcgct
gaggcagtcgatctgtgcctgatcgcgaaggacggcacggagacgcgggtgcgtctcgac
gaggtcgacggttacgtgtggcacgcctacctgccgaccgtcgtgcccgggcagcggtac
gggtaccggatccacggaccgtgggacccctcggccgggcaccgctgcgaccccagcaag
ctgctcctcgacccgtacggcaaggcgttcgacggcgaattcgacggcgaccggtccctg
ttctcctatgacatcgacgcgcccgcctccgaggatgccggggacgacgacgccggggac
acagttctgatcgtcgacaccgacgacgacctcgaggcggaggacgccggggacgcactc
gaagcggaagccgaggacgactcggcgccggggctgcccggacacgattcgctcggccat
acgatgacgacggtcgtgatcaacccgttcttcgactgggccgccgaccgcgcaccgaaa
cacccgtatcacgacaccgtgatctacgaggcccacgtcaagggcatgacggcgacgtat
cccggtgtgccggaagaactccgcggcacgtacgcgggcctcgcgcatccggtgatcatc
gaccacctcgtcgacctcggcgtcacggcgatcgaactgatgccggtgcaccagttcatg
cacgatcagaccctgctcgacaaggggctgcggaactactggggctacaacacgttcggc
ttcctggccccgcacaccgggtattcgtcggcggagaagccgggcgcggcggtgtcggag
ttcaaggcgatggtccgctcgttccacgaggcgggaatcgaggtgatcctcgacgtcgtc
tacaaccacaccgccgaaggcaaccatctcggtccgacgatctcgttccgcggcatcgac
aacgccgcctactaccggctcgtcgacggcgacgccgagcactacatggactacacgggc
accgggaacagcctcaacgcccggcacccgcacacgctgcagctgatcatggactcgctg
cggtactgggtcaccgagatgcacgtcgacggcttccgcttcgacctcgcgtcgacgctc
gcccgcgaactgcacgacgtcgaccggctctccgcgttcttcgacctcgtccagcaggat
ccgatcgtcagccaggtcaagctcatcgccgaaccgtgggacatcggcgagggcggctac
caggtgggcaacttccccggtctgtggacggaatggaacggcaagtaccgggacaccgtc
cgcgactactggcggggcgaaccggcgacgctcggcgaattcgcgtcccggctcaccggc
tcctccgacctctacgaggcgaccgggcgccgccccggcgcgagcatcaacttcgtcatc
gcccacgacgggttcaccctgcacgacctcgtgtcgtacaacgagaagcacaacgaggcc
aacggcgaggacaacaacgacggcgagagccacaaccggtcctggaactgcggcgtggag
ggacccaccgacgatccggagatccacgatctgcgggggcggcagagccgcaacatcctg
gccaccctcctgctcagccaggggacgccgatgctggcgcacggtgacgagatgggccgc
acccagcagggcaacaacaacgtgtactgccaggactcggaactgtcgtggatggactgg
tcgctggccgataccaacgccgacctcgtcgagttcaccaaacgggtgatcgcgctgcgg
atgaagaatccggtgttccgccgccgccggttcttcgagggcacccccatccgcagcggc
gaccagacccgcgacatcgcctggctcaccccgtccggtgaggagatgacccccgaggac
tgggacagcggtttcgggaagtccctcgcggtgttcctcaacggcgagggcatccccgaa
cccaaccatcgcggtgagcgggtggtcggcgactcgttcctgctgtgtttcaacgcgcac
gacgaggagatcgagttctcgacgccgaattccgattacgccgacgagtgggcggtggtg
ctcgacaccgccgtgccgaccggggcgaaggacgcggtgatcaaggccgggaattcgctg
caggtcgagtcccggtcgctggtcgtgctgcgccggaccgcctga
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