Rhodococcus pseudokoreensis: JWS13_41935
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Entry
JWS13_41935 CDS
T08508
Name
(GenBank) pseudouridine synthase
KO
K06177
tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:
5.4.99.28
5.4.99.29
]
Organism
rpsk
Rhodococcus pseudokoreensis
Brite
KEGG Orthology (KO) [BR:
rpsk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rpsk03009
]
JWS13_41935
03016 Transfer RNA biogenesis [BR:
rpsk03016
]
JWS13_41935
Enzymes [BR:
rpsk01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.28 tRNA pseudouridine32 synthase
JWS13_41935
5.4.99.29 23S rRNA pseudouridine746 synthase
JWS13_41935
Ribosome biogenesis [BR:
rpsk03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
JWS13_41935
Transfer RNA biogenesis [BR:
rpsk03016
]
Prokaryotic type
tRNA modification factors
Psudouridine synthases
JWS13_41935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
QSE94709
LinkDB
All DBs
Position
8024747..8025640
Genome browser
AA seq
297 aa
AA seq
DB search
MAGAPLPVRNGLGPDRIRMPAGLGAKTVAEFLVETYPDERAHWLSLIDGGEVVDEHGRVV
DRVTRYAPTRFVYFYRDPAPEIPVPFEIDILHRDDHLVVIDKPHFLATIPRGAHITETAV
VRLRRALDLPDLTPAHRLDRMTAGVLVFLIRREDRRAYQELFVSQQVTKEYEAVAGHDPA
LEFPRIIRSRIVKEHGIMTATEEPGEPNSETVVDLIETRDARARYRLLPKTGRTHQLRLH
MSSLGLPIEGDNYYPDFRRSEPGDFSTPLRLLARAIEFTDPRSGRVRRFESRRTLGW
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
gtggccggggcgccgctgcccgtccgcaacggtctcggtcccgatcgcatccggatgccg
gccgggctcggtgcgaagaccgtcgccgaattcctggtcgagacgtaccccgacgagcgg
gcgcactggctgtcgctgatcgacggtggggaagtcgtcgacgaacacggcagggtcgtc
gaccgcgtcacccgctatgcgccgacccggttcgtgtacttctaccgtgaccccgcaccc
gagatcccggttccgttcgagatcgacatcctccaccgcgacgaccacctcgtggtgatc
gacaagccccacttcctcgcgaccatcccgcgtggcgcgcacatcaccgagacggcggtc
gtgcggttgcggcgggcgctcgaccttcccgatctcacgccggcgcaccggctcgaccgg
atgacggccggtgtgctggtgttcctgatccggcgggaagaccgccgggcgtatcaggaa
ctgttcgtctctcagcaggtcaccaaggaatacgaggccgtcgccgggcacgatcccgcg
ctggagtttccgcgcatcatccgcagccgcatcgtcaaggaacacgggatcatgacggcc
acggaggaaccgggcgagccgaacagcgaaaccgtcgtcgacctgatcgagacccgcgac
gcccgcgcccgctaccggctgctgccgaagaccggccggacccaccaactgcggctgcac
atgtcgtcgctggggctgccgatcgaaggcgacaactactacccggacttccgccgatcc
gagcccggcgacttctcgacgccgttgcggttgctggcgcgggccatcgagttcaccgat
ccccgttcgggccgggtccgccggttcgagagtcgccgcacactcgggtggtga
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