Rhodococcus pseudokoreensis: JWS13_42330
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Entry
JWS13_42330 CDS
T08508
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
rpsk
Rhodococcus pseudokoreensis
Pathway
rpsk00061
Fatty acid biosynthesis
rpsk00071
Fatty acid degradation
rpsk01100
Metabolic pathways
rpsk01212
Fatty acid metabolism
rpsk02024
Quorum sensing
rpsk04146
Peroxisome
Module
rpsk_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
rpsk00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
JWS13_42330
00071 Fatty acid degradation
JWS13_42330
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
JWS13_42330
09145 Cellular community - prokaryotes
02024 Quorum sensing
JWS13_42330
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rpsk01004
]
JWS13_42330
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rpsk04147
]
JWS13_42330
Enzymes [BR:
rpsk01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
JWS13_42330
Lipid biosynthesis proteins [BR:
rpsk01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
JWS13_42330
Exosome [BR:
rpsk04147
]
Exosomal proteins
Exosomal proteins of breast milk
JWS13_42330
Exosomal proteins of breast cancer cells
JWS13_42330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
QSE94779
LinkDB
All DBs
Position
8103515..8105035
Genome browser
AA seq
506 aa
AA seq
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MLNLATMLADTARRTPDRTAVIEGDRTLTFGEIDAAANSVAHFLLSLGLRPGDRVALTIA
NVVEFPIVYFGILKAGGAVVPLNTMLKREEVAYHLRDSGATAYFCTVPGLGDEAWHGFQD
VESCEHLVTLGSALLDGPGVGTTLADALAEHPAEDVLQVTEATDTAVVLYTSGTTGRPKG
AELTHANMVLNAVGHNQLLDARADDVHLVTLPLFHSFAQTVQLNAGFAMGATLVLLPRFD
AAEALALMTQHRVTVFAGVPTMYWALLNKSADGIDARLDGLLRIALSGAAAMPVDVLERF
RDVFGVGIREGYGLSETSPTVTFNPLDLPNRSGSIGTPIWGVEVKLIDDHWTEVPVGEPG
ELAVRGYNVMKGYLGRPEATEEVIRDGWFRTGDIATRDEDGYYFIVDRAKDLIVRGGFNV
YPRELEEVIIGHPEVSLVAVVGIPDERIGEEVKAFVIREPGSELKEEDLIGWSRERLAAY
KYPRLVEFRDSLPMNATGKLLKRALR
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atgctcaacctggccaccatgcttgccgacactgctcgacgcactcccgacagaaccgct
gtcatcgaaggtgaccgaaccctcaccttcggtgaaatcgatgcggctgcgaacagtgtc
gcccattttcttctctcgctggggttgcgccccggcgaccgcgtcgccctgacgatcgcg
aatgttgtcgagtttccgatcgtctacttcggcatcctcaaggccggtggagcggtggtt
ccgctcaacacgatgctcaagcgggaggaggttgcctaccacctccgtgactcgggcgcg
acggcatacttctgtaccgtgccggggctcggcgacgaggcgtggcacggattccaggac
gtcgaatcctgcgagcatctggtcacccttggctccgcgttgctcgatgggccaggcgtg
ggaacaaccttggctgacgcgttggccgaacaccccgccgaagacgtcttgcaggtgacc
gaggcaacggacacagcggtggtcctctacacgagcgggacgaccggcaggccgaagggg
gcggagctcacccacgccaacatggtcctcaatgccgtcgggcataaccaactgctcgac
gcccgagccgacgacgtacatctggtcactcttccgctcttccactcgttcgcacagacc
gtgcagctgaacgccggtttcgcaatgggtgccaccctggtcctgctgccacggttcgac
gcagccgaggctctggcgttgatgacgcagcaccgggtgacggtcttcgccggtgtcccg
acgatgtactgggccctgctcaacaagtctgctgacggaatagacgctcgcctcgacggt
ctcctgcgaatcgcgctttccggcgcagctgccatgcccgtcgatgtgctggagcggttc
agggatgtcttcggtgtcggaatccgggaaggctacggactatccgaaaccagtccgacc
gtcacgttcaacccgcttgacctaccgaaccggtcgggatcgatcggcacaccgatctgg
ggagtggaggtgaagctcatcgacgatcactggaccgaggttcccgtcggtgagccagga
gaactcgctgtacgtggatacaacgtgatgaagggatacctggggcggcccgaggcgaca
gaggaagtgatccgcgacggctggtttcgcacgggcgatatcgccacgcgagacgaggac
ggctactacttcatcgtcgatcgcgccaaagatttgatcgtgaggggaggcttcaacgtc
tacccgcgcgagctcgaggaggtgatcatcggccatccagaggtcagcctcgtggccgtc
gtcggaatccccgacgagcgaatcggtgaggaagtgaaagccttcgtcatccgagaaccc
ggctcggaattgaaggaggaagacctgatcggctggtcacgggaacggttggcggcttac
aagtacccgcgactggtggagttcagggatagtttgccgatgaacgcgacgggaaagctc
ctcaagcgggctctgcgatga
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