Rhodococcus pseudokoreensis: JWS13_42520
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Entry
JWS13_42520 CDS
T08508
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
rpsk
Rhodococcus pseudokoreensis
Pathway
rpsk03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
rpsk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
JWS13_42520 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rpsk03400
]
JWS13_42520 (uvrA)
DNA repair and recombination proteins [BR:
rpsk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
JWS13_42520 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
JWS13_42520 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_DNA-bind
ABC_tran
AAA_21
AAA_16
AAA_29
nSTAND1
AAA_25
AAA_33
DnaJ_CXXCXGXG
RsgA_GTPase
AAA_22
NACHT
Anti-TRAP
MeaB
Viral_helicase1
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
QSE94813
LinkDB
All DBs
Position
8145883..8148426
Genome browser
AA seq
847 aa
AA seq
DB search
MPTLDPGPPAEPSPARAFAGIEVFDAREHNLAHVDVFIPRDCIVAFTGVSGSGKSSLAFG
TIYAEAQRRFLESVTPYARRLMDQVGAPRVGDITGLPPAVALQQARGHTSARSSVGTLTH
ISNVLRMLFSRAGTYPPDADILDSNAFSPNTPEGGCPTCHGLGRTHDVDVDALVPDPSRS
IRDGAVAAWPGAWLGKNYRDILDTLGIDVDRPWSELPADQREWILTTEEQPTVTVSPIRD
PGKMVRDYQGTFSSARTYVLHTFATTKSATQRAKVSRYLVSRPCSACDGKRLRPEALAVR
FAGLDIADATELPLADLATVLEAAVASRDAPADDATDRASEALVDNLLGRLRGLSELGLG
YLSLGRSTTTLSPGELQRLRLATQLQSGLFGVLYVLDEPSAGLHPADTEALVAAVRRLRA
AGNSVFVIEHNLDVVRAADWIVDVGPDAGEHGGRVLYSGPVDGLAAIAESVTRRYLFEQS
GNCPELAQPSMWIELSGITMHNLRDLSVRIPLGVLTAVTGVSGSGKSTLVSRVLTDVVAR
HLGVDDEPGPDTVSDDADDSTAVMADGRDTTEPTVVSSHGLGHIDRLVRVDQTPIGRTPR
SNLATYTGLFDVIRKLFAAHPTARERGYSPGRFSFNVTGGRCDECEGAGVITIGMLFLPE
ASAPCPVCAGARYNAETLEILVDGRSIADVLGMTVDDARDFLNHVPAAKKSLDMLVEVGL
GYLRLGQSATTLSGGEAQRVKLASELQRVRSGHTLYVLDEPTTGLHPADVDRLMGVLRRL
VAAENTVVLVEHDMSVIASADWMIDLGPGGGDNGGRIIASGQPAIVAESAGSATAAYLGR
HLAPSAV
NT seq
2544 nt
NT seq
+upstream
nt +downstream
nt
gtgccgaccctcgatcccggaccgccggccgaaccatcacccgcccgggcattcgccggc
atcgaggtgttcgacgcccgcgaacacaacctcgcccacgtcgacgtgttcattccccgg
gattgcatcgtcgcgttcaccggggtgtcgggatcgggcaagtcgtcgttggccttcggc
accatctacgccgaagcgcaacgacgctttctcgagtccgtcaccccgtacgcgcgccga
ttgatggatcaggtcggcgcacccagggtgggggacatcaccgggcttcccccggcggtc
gcgttgcagcaggcccgcggtcacacgtccgccagatcgtcggtcggcaccctcacccac
atctccaacgtgctgcgcatgctgttctccagggccggcacctacccgccggacgccgac
atcctcgactcgaacgccttctcgcccaacaccccggaaggcggatgcccgacctgtcac
ggactcggacgcacccacgacgtcgacgtcgacgccctggtcccggacccgagccgcagt
atccgcgacggcgccgtcgcggcctggcccggtgcgtggctggggaagaactaccgcgac
atcctcgacaccctcgggatcgatgtggaccgcccctggtcggaactccctgcagaccaa
cgtgagtggatcctcaccaccgaggagcagcccacggtgacggtgtcaccgatccgcgac
ccgggcaagatggtgcgcgactatcagggaacgttctcgagcgcccgcacctacgtcctg
cacaccttcgcgacgacgaagagcgcaacccagcgggcgaaggtctcgcgatacctggtc
tcccggccctgcagcgcgtgcgacggtaagcggctgcgaccggaggcgctagcggttcgg
ttcgccggcctcgacatcgccgacgcgaccgaactgccactggccgatctggccacggtc
ctcgaagccgccgtcgcatcccgcgatgcccccgcagacgacgctaccgaccgagcatcg
gaggcgttggtggacaacctactcggacgcctccgggggttgtccgagctcggcctggga
tacctgagtctcggccgatcgaccaccaccctgtcgccgggggagcttcagcgcctgcgg
ctggccacccagctgcagtcgggcctgttcggagtgctgtacgtcctggacgagccgtcc
gcgggcctgcaccccgccgacaccgaggcgctggtcgctgccgtgcggcggcttcgcgcg
gcaggcaactccgtcttcgtcatcgaacacaacctcgacgtcgtccgggcggcggactgg
atcgtcgatgtcggccccgatgccggggagcacggtgggcgggtcctctacagcggcccg
gtggacggtctcgctgcgatcgccgaatccgtcacccgccgataccttttcgaacaatcg
ggcaattgcccggagcttgcacagccgagcatgtggatcgaactctccggaatcacgatg
cacaatctgcgggatctgagcgtgcggatcccgctcggggtgctcaccgcggtcaccggc
gtgtccggctcgggcaaatccacgctcgtcagtcgcgtgctcacggacgtcgtcgcccgg
cacctcggcgtcgacgacgaacccggacccgacaccgtcagcgacgacgccgacgactcc
acggccgtgatggccgacggccgcgacaccaccgaaccgacggtggtgtcgtctcacggg
ctcggacacatcgaccggctggtgcgggtggaccagaccccgatcgggcggactccgcgc
tcgaatctcgcaacctacaccggactgttcgacgtgatccggaagcttttcgctgcacac
cccaccgcccgcgagcgcggatacagtcccggccgattctcgttcaacgtcaccggaggc
cgatgcgacgagtgcgagggcgccggtgtgatcaccatcggcatgctgtttctgcccgag
gcctccgcgccgtgcccggtctgcgccggcgcacgctacaacgccgagaccctcgagatc
ctggtcgacggccggtcgatcgccgacgtcctcgggatgaccgtcgacgatgcccgggac
ttcctgaaccacgtcccggccgcgaagaagagcctggacatgctggtggaggtgggtctc
ggatatctgcggctcggccaatcggccaccacgctgtcgggtggggaggcgcaacgcgtc
aagctggccagcgaactgcagcgcgtccgatccgggcacacgctctacgtgctcgacgaa
cccaccaccggactgcaccccgccgacgtggaccgactcatgggggtgctgcgccgtctc
gtcgcggcagaaaacaccgtcgtcctggtcgaacacgacatgtcggtcatcgcctcggcg
gactggatgatcgatctcggacccggcggcggagacaacggcggccgcatcatcgcctcg
ggtcagccggcgatcgtcgcagagtcggctggctccgccaccgccgcctatctcggccgg
cacctcgcaccgtccgcggtgtag
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