Rhodococcus pseudokoreensis: JWS13_42705
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Entry
JWS13_42705 CDS
T08508
Name
(GenBank) hydroxymethylglutaryl-CoA lyase
KO
K01640
hydroxymethylglutaryl-CoA lyase [EC:
4.1.3.4
]
Organism
rpsk
Rhodococcus pseudokoreensis
Pathway
rpsk00280
Valine, leucine and isoleucine degradation
rpsk00650
Butanoate metabolism
rpsk00907
Pinene, camphor and geraniol degradation
rpsk01100
Metabolic pathways
rpsk01120
Microbial metabolism in diverse environments
rpsk04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
rpsk00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
JWS13_42705
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
JWS13_42705
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
JWS13_42705
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
JWS13_42705
Enzymes [BR:
rpsk01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.4 hydroxymethylglutaryl-CoA lyase
JWS13_42705
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Gene cluster
GFIT
Motif
Pfam:
HMGL-like
Motif
Other DBs
NCBI-ProteinID:
QSE94847
LinkDB
All DBs
Position
complement(8183954..8184877)
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AA seq
307 aa
AA seq
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MTAIPPEVDIREVGPRDGLQIEKPIPTAAKLDLIDALAATGVRRIEATSFVSPRAVPALA
DAEAVAAQLGRWPHVTFSALVAGLGGVKRALAAGLTHLEYVVSASDGHSRANVGRSSEES
IALITPIAELIHQAGGTLEVIVAIAFDCPFDGPTPPDRVADIARRAVLSGADALSVADTI
GTATPVRTTDVLTRVRAAAPGVDLGLHLHDTRGQGLANAWAAYASGIRQFDASVGGLGGC
PFAPGASGNIATEELVYMFEDGGIATGIDIDRELDAARLAERLLGRSLAGRLLAAGGRPV
PSGTARN
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgcgattccacccgaggtcgacatccgggaagtcgggccccgcgatggactgcag
atcgagaagcccattcccactgccgccaagctggatctgatcgacgcgctcgccgcgacc
ggtgtccggcgcatcgaggccacgtccttcgtctccccgcgggccgtcccggcgctggcc
gacgccgaggccgtcgccgcccaactcggccgctggccacacgtcacgttctcggcgctg
gttgccggactcggcggcgtcaagcgagcactcgcggcaggcctgacccacctcgaatac
gtcgtctccgcgtccgacgggcacagccgggccaacgtcggtcgcagcagcgaggagtcg
atcgcgctgatcacccccattgccgaactgattcaccaggcgggcggcacactcgaagtg
atcgtcgccatcgccttcgactgcccgttcgacgggcccaccccaccggaccgcgtggcc
gacatcgcgcggcgtgcggttctttcgggtgcggatgcgctgtccgtcgccgacaccatc
ggcacggcgacgccggtgcgcaccaccgatgtactcacccgggtgcgcgccgcggccccc
ggcgtggacctcggcctgcacctgcacgacacccgcggccaggggctggcgaacgcgtgg
gcggcatacgcctcgggcatccgccagttcgacgcctccgtcggcgggctcggtgggtgc
cccttcgcgccgggcgcgagcggcaacatcgccaccgaggaactggtctacatgttcgag
gacggcggcatcgcgaccggcatcgacatcgacagggaactcgacgccgctcgactggcc
gagcgcctgctcggcagatccctcgcaggcagactgctcgcggccgggggccgaccggtt
ccctccggcaccgcccgcaattga
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