Rhodococcus pseudokoreensis: JWS13_42800
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Entry
JWS13_42800 CDS
T08508
Name
(GenBank) ABC transporter ATP-binding protein
KO
K02031
peptide/nickel transport system ATP-binding protein
K02032
peptide/nickel transport system ATP-binding protein
Organism
rpsk
Rhodococcus pseudokoreensis
Pathway
rpsk02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rpsk00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
JWS13_42800
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rpsk02000
]
JWS13_42800
Transporters [BR:
rpsk02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
JWS13_42800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
SMC_N
AAA_22
oligo_HPY
AAA_16
AAA_29
DUF87
Mg_chelatase
PRK
nSTAND3
AAA_5
ATP-synt_ab
AAA_33
nSTAND1
MobB
AAA_30
TsaE
Zeta_toxin
NB-ARC
NACHT
FtsK_SpoIIIE
AAA_13
Motif
Other DBs
NCBI-ProteinID:
QSE94865
LinkDB
All DBs
Position
8205007..8206656
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AA seq
549 aa
AA seq
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MSKAETEDRFPVLDVRKLRVGYRTSSETVPVVEGADLTLGAGQVLALVGESGSGKTTIGQ
AVLGLLPANGDVLAGEIRHDGEDLVTAGADRMRELRGSRISLIPQDPTVSLNPIKRIGPQ
IADVLKLHTDENRATRREHVHRLLEQVGFTEVERRYRQYPHELSGGMRQRVLIAVAIAGD
PDLIVADEPTSGLDVTVQKRILDLLDELRERTRTSMVLITHDLGVAADRSDRIAVMRAGE
IVEQGETRSVIADPAHEYSRHLLRSAPTLGRGTRTAPTSTDDSESPVVLSARHLTKHFAV
PGARGAVKAVDDVSFDVRRGQTLSIVGESGSGKSTTARMLVRLIEPTSGSIEILGTDVTA
LSRRQFRRHRRNIQIVYQNPYAAFDPRFDLFSIIEEPLRAHGSTTRADRAARVRRALEEV
ALPAAYLERKPSELSGGQRQRVAIARALVLEPKIVVLDEPVSALDVSVQDQILVLLDRLQ
RELDLSYVFISHDLAVVRAISDHVAVMNHGRVVEHGAAEQVFTDPATDYTAELLAAVPGR
GSSARDKVY
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
gtgagcaaggccgagacagaggatcggtttccggtcctggacgtgcggaaactgcgggtc
gggtaccgcacgtcgtcggagaccgttcccgtggtggagggcgccgacctgacactcggc
gcgggacaggtgctggcactcgtcggtgagtcgggctccggtaagacgacgatcggccag
gccgtcctcggattgctgccggcgaacggtgacgtgctggcgggggagatccggcacgac
ggcgaggacctcgtgaccgcgggcgccgaccggatgcgggaactgcggggttcgcggatc
agcctgatcccgcaggaccccaccgtgtcgctcaacccgatcaagcggatcggcccgcag
atcgcggacgtcctgaaactgcacaccgacgagaaccgggcgacgcgccgcgagcacgtc
caccgtctgctcgaacaggtgggcttcaccgaggtggagcgtcgctaccggcaatacccg
cacgagttgtccggcggaatgcggcagcgtgtgctgatcgccgttgccatcgcgggcgac
cccgacctgatcgtggcggacgaaccgacgtcgggtctcgacgtcaccgtgcagaagcgg
atcctcgacctcctcgacgaattacgcgagcgcacaaggacgtcgatggtcctcatcacc
cacgatctgggtgtcgccgccgatcgctccgatcgcatcgccgtcatgcgtgccggtgag
atcgtcgagcagggggagacgcggtccgtgatcgcagacccggcgcacgagtactcgcgg
cacctgctgcgcagcgctcccaccctcggacggggaacccggaccgcgccgacgagcacg
gacgattcagagtccccggtcgtgctgtcggcgcggcacctgaccaagcacttcgccgtg
cccggcgcgaggggcgcggtgaaggccgtcgacgacgtctcgttcgatgtccggcgggga
cagacgctgtcgatcgtgggggagtccggctcggggaaatcgaccaccgcccggatgctg
gtacggctcatcgaaccgacgagtggatcgatcgagatcctcggaaccgacgtgaccgcg
ttgtcgcgcagacagttccggcgacaccgccgaaacatccagatcgtgtaccagaacccg
tacgcggccttcgacccgcggttcgatctgttctcgatcatcgaagagcccctccgcgcg
cacggcagcaccacccgcgcggaccgtgcagcgcgcgtgcggcgggcactcgaggaggtc
gcgttgcccgctgcctatctggagcggaagccgagtgagctgtccgggggccagcgtcag
cgcgtcgcgatcgccagagcgttggtgctggagccgaagatcgtcgtactcgacgagccg
gtctcggcgctggacgtctcggtgcaggaccagattctggtcctgctcgaccgactgcag
cgcgaactcgacctcagctatgtcttcatctcccacgacctcgccgtggtgcgtgcgatc
agtgaccatgtcgcggtgatgaaccacggaagggtcgtggaacacggagcggccgaacag
gtcttcaccgaccccgcgaccgactacacggccgaactgctcgcggccgtccccggtcgg
ggatcgagtgcacgcgacaaggtgtactga
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