Rhodopseudomonas palustris TIE-1: Rpal_0009
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Entry
Rpal_0009 CDS
T00722
Name
(GenBank) putative circadian clock protein, KaiC
KO
K08482
circadian clock protein KaiC
Organism
rpt
Rhodopseudomonas palustris TIE-1
Brite
KEGG Orthology (KO) [BR:
rpt00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
Rpal_0009
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Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
DnaB_C
RecA
AAA_24
NPHP3_N
NACHT
AAA_22
AAA_16
AAA_29
nSTAND3
AAA
IstB_IS21
SLFN-g3_helicase
AAA_14
AAA_30
AAA_10
DUF7125
APS_kinase
AAA_35
ABC_tran
UPF0242
HIP1_clath_bdg
Hydrolase
Thymidylate_kin
PAXNEB
Motif
Other DBs
NCBI-ProteinID:
ACE98571
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Position
complement(10724..12415)
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AA seq
563 aa
AA seq
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MADGISKSLTGIEGFDDLTLGGLPSGRPSLVCGSAGCGKTLFASTFLINGARLYDEPGVF
VTFEERPVDIVDNVASLGFDLQGLIAQERVLIEHIAIDPTEVAEVGDYDLEALFLRLEFA
VDQIGAKRIVLDTIESLFSAFQNPAVLRAEIRRLFDWLKQKGLTAVITGERGDGTLTRQG
LEEYVSDCVILLDHRVDNQISTRRLRIVKYRGTAHGTNEYPFLIDEEGFSVLPVSSLGLS
HKVHEERISSGVPDLDAMLSGGGFYRGTSVLITGVAGSGKSSLACMMVDAACRRGEKALY
LSFEESEAQTVRNMKSVGTDLGRWLSTGQLRYIGARPTFYSLEMHLAVMLREVARFKPDL
VVLDPISAFTESGQIGEVQSMLLRIVDYLKSNGITGAFTHLAHGAQTETDAGLSSLMDAW
ILLLNREAHGEFNRELYLLKARGIAHSNQVREFVMSDDGIHLLPPYLGEGGALTGSARRA
EEAKERRVESERRTEVARLQDQIEQRRRRALAQIEALKADLAVDEAELQRLTQAEASFRA
QSERDVTEMARRRGFIGSADDTD
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atggcggacggcatatccaaatctctgacggggatcgaagggttcgacgatctcaccctt
ggcggcttgccctcggggcgccccagtctggtgtgcggctcggccggatgcggcaagacg
ctgttcgcgtccaccttcctgatcaacggtgcgcgcctctatgacgagcccggcgtgttc
gtcacctttgaagaacgcccggtcgacatcgtcgataacgtcgcctcgctcggattcgat
ctgcaggggctgatcgcgcaggagcgggtgttgatcgagcacatcgcaatcgatccgacc
gaggtcgccgaagtcggtgactacgatctcgaagcactttttctccggctcgagtttgcg
gtcgaccagatcggcgccaagcggatcgtgctcgacaccatcgagagcctgttctcggca
tttcagaatcccgccgtgctgcgcgccgaaatccggaggctgttcgactggctgaagcag
aaggggctgaccgcggtcatcaccggcgagcgcggtgacggcacgctgactaggcagggg
ctcgaagaatacgtctccgactgcgtcatcctgctcgatcaccgtgtcgacaatcagatt
tcgacccgccgactgcgcatcgtcaaatatcgcggcactgcgcacggcaccaacgaatat
ccgttcctgatcgacgaagagggcttcagcgttctgccggtgtcttcgctcgggctgtcg
cacaaggtgcacgaggagcggatctcgagcggcgttcccgacctcgacgcgatgctgtcc
gggggcgggttctaccgcggcaccagcgtgctgatcaccggcgtcgccggctccggcaag
agttcgctggcctgtatgatggtcgacgccgcctgccggcggggcgagaaggcactatac
ctgtcatttgaggaatccgaggcgcagaccgtccgcaatatgaaatcggtcggtaccgat
ctcggccgctggctgagtaccggtcagcttcgctacatcggggcgcgtccgacgttctac
agcctggaaatgcatctggcagtgatgctgcgcgaagtcgcccgcttcaagccggacctc
gtggtgctcgacccgatctcagcgttcacggagagtgggcagatcggtgaagtgcaatcg
atgctgctgcggatcgtcgattatttgaaatccaacggcatcaccggcgccttcacgcat
ctggcgcacggcgcccagaccgagaccgatgccggcctgtcgtccctgatggacgcctgg
atcctgctgctcaatcgcgaagcgcatggcgagttcaatcgcgagctttatctcttgaag
gcccgtggcatcgcgcattccaaccaggtgcgcgagttcgtgatgtcggacgatggcatc
catctgctgccgccgtatctcggcgaaggcggcgcgctgaccgggtcggcgcgcagggcc
gaagaagccaaggagcgccgcgtcgagagcgagcgccgcaccgaggtggcgcggctgcag
gatcagatcgagcagcgccgccggcgtgcactcgcacaaatcgaagcgttgaaggccgat
cttgcggtcgacgaagcagagctgcagcggctgacccaggcggaagccagctttcgcgcg
cagagcgagcgcgatgtcaccgaaatggcgcgaagacggggtttcatcggctcggccgat
gacacggactag
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