Rhodopseudomonas palustris TIE-1: Rpal_0036
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Entry
Rpal_0036 CDS
T00722
Name
(GenBank) phenylalanyl-tRNA synthetase, beta subunit
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
rpt
Rhodopseudomonas palustris TIE-1
Pathway
rpt00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
rpt00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Rpal_0036
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
rpt01007
]
Rpal_0036
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rpt03016
]
Rpal_0036
Enzymes [BR:
rpt01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
Rpal_0036
Amino acid related enzymes [BR:
rpt01007
]
Aminoacyl-tRNA synthetase
Class II (U)
Rpal_0036
Transfer RNA biogenesis [BR:
rpt03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
Rpal_0036
Prokaryotic type
Rpal_0036
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B3_4
tRNA_synthFbeta
FDX-ACB
tRNA_bind
B5
Motif
Other DBs
NCBI-ProteinID:
ACE98598
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All DBs
Position
complement(40444..42855)
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AA seq
803 aa
AA seq
DB search
MKLTLSWLKDHLDTDEPLEKLADKLTMIGLEVEGIEDKAKVLAPFTIAKVLTAAKHPNAD
KLQVCTVDVGDGAAPVQVVCGAPNARAGLVTVFAPPGTYIPAKDFTLGIGNIRGVESRGM
LCSAAELQISEDHDGIIELPADAPVGAAYAAWAGLGDPVLDINLTPNRQDCAGVHGIARD
LAAADMGKFKDPGIKPIKGEFPCPVSVTVEDSTLCPGFALRLVKGVKNGPSPEWLQKRLT
AIGLRPINALVDITNYLTFDRSRPLHVFDAAKVKGNLVVRRAKDGETLLALDGRTYTLDS
SVCVIADDHGVESLAGIMGGELSGCSAETTDVLIESALWNEINIAQSGRKLGINTDARYR
FERGVDPAFMLPGLELATKLVMEFCGGTPSEAVVVGNPFADDKIIDFPLAEVKRLAGIEV
SLTEIRRILNHLGFTVVGQAPVVKVAVPSWRSDVHGKADIVEEIVRIVGVDKVPLTPFER
GDAPRKPVLTQIQNRTRRAKRALAARGLTEAVTWSFISKPFAEAFGGGQPELALANPIAS
DLSDMRPSLLPGLIAAAQANADRGSPDLSLFEVGQVFKGDRPQDQFMAASGVRRGVASSA
GLGRHWSGSAQATALDAKADAFAVLAAAGAPMAGLQIATNKLPAWLHPGRSGAIQIGPQN
VLGYFGELHPRVLEQLGADGPLVAFEVILEKIPDPKQRPTRAKPALELSAFHPVSRDFAF
IVDRKVAVADIVRAAQGVDKKLITSVSVFDVYEGKGIDPDKKSVAIAVTLQPRDKTMTDQ
EIEAVAAKIVAEVTKKTGGSLRG
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
atgaaactcaccctctcctggctgaaagatcatctcgacaccgacgagccgctggaaaag
ctcgccgacaagctcaccatgatcgggctcgaagtcgagggcatcgaggacaaggcgaag
gtgctggcgccgttcaccatcgccaaggtgctaacggccgccaagcatcccaacgccgac
aagctgcaggtctgcacggtcgacgtcggtgacggggctgcgccggtgcaggtggtgtgc
ggcgcgccgaatgcgcgcgccggcctcgtcacggtgttcgcgccgcccggcacatatatt
ccggccaaggacttcacgctcggcatcggcaatattcgcggcgtcgagagccgcggcatg
ctgtgctcggccgctgaattgcagatctccgaggatcacgacggcatcatcgagctgccg
gccgatgcgccggtcggtgccgcctatgcggcctgggccgggctcggcgatccggtgctc
gacatcaacctgacgccgaaccggcaggactgcgccggcgtgcacggcatcgcgcgcgat
ctcgccgccgccgacatgggcaagttcaaggacccgggtatcaagccgatcaagggcgaa
ttcccgtgcccggtcagtgtcactgtcgaagacagcacgctgtgccccggcttcgcgctg
cggctggtgaagggcgtcaagaacggcccgtcgccggaatggctgcagaagcgcctgact
gcgatcggactgcgcccgatcaacgcgttggtcgacatcaccaactacctgacattcgat
cgctcgcgcccgctgcacgtgttcgacgccgccaaggtgaagggcaatctggtggtgcgc
cgcgccaaggacggcgagacgctgctcgcgctcgacggccgcacctacacgctggattcg
tcagtctgcgtgatcgccgacgatcacggcgtcgaatcgctcgccggcatcatggggggt
gagctgtccggctgctcggccgagaccaccgacgtgctgatcgaatcggcgctgtggaac
gagatcaacatcgcccagtcgggccgcaagctcggcatcaacaccgatgcgcgctaccgc
ttcgagcgcggcgtcgatccagccttcatgctgcctgggctcgagcttgccaccaagctg
gtgatggagttctgcggcggcacgccgtcggaggcggtggtggtcggcaatccgttcgcc
gacgacaagatcatcgacttcccgctcgccgaggtgaagcgtctggccggcatcgaagta
tcgctcaccgagatccgccgtatcctcaatcacctcggcttcacggtcgtcgggcaggcg
ccggtggtgaaggtcgcggtgccgtcgtggcgcagcgacgttcatggcaaggccgatatc
gtcgaggaaatcgtccggatcgtcggcgtcgacaaggtgccgctgacgccgttcgagcgc
ggcgatgccccgcgcaagccggtactcacccagatccagaatcgcacccgccgcgccaag
cgcgcgctggcggcgcgcggcctgaccgaggcggtgacctggtcgttcatctccaagccg
ttcgccgaagcgttcggcggcggccagccggagctggcgctcgccaatccgatcgcgtcc
gatctgtccgacatgcggccgagcctgctgcccggcctgatcgccgccgcacaggccaac
gccgatcgcggttcgcccgatctgtcgctgttcgaagtcgggcaggtgttcaagggcgac
cggccgcaggatcaattcatggctgcgagcggcgtccgccgcggtgtcgcgtcctccgcg
ggcctcggccggcattggtcgggctcggcgcaggcgaccgcgctcgatgccaaggccgat
gcgttcgcggtgctggctgcggccggtgcgccgatggcggggctgcagattgccaccaac
aagctgccggcctggctgcatccgggccgctccggcgcgatccagatcgggccgcagaac
gtgctcggctatttcggcgagctgcatccgcgggtgctcgaacagctcggggcggatggc
ccgctggtggcgttcgaagtgatcttggaaaagatccccgatccgaagcagcggccgacc
cgcgccaagccggcgctcgaactgtctgcgttccacccggtgtcgcgcgacttcgccttc
atcgtcgatcgcaaggtcgcggttgccgatatcgtccgcgccgcgcagggcgtcgacaag
aagctgatcacctcggtcagcgtgttcgacgtctatgaaggcaagggcatcgatcctgac
aaaaagtcggtggcgatcgccgtgacgctgcagccgcgcgacaagaccatgaccgatcag
gagatcgaagcggtcgcggccaagatcgtggcggaagtcaccaagaagaccggcggcagc
ctgcgcggctga
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