Rhodopseudomonas palustris TIE-1: Rpal_0069
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Entry
Rpal_0069 CDS
T00722
Name
(GenBank) integration host factor, beta subunit
KO
K05788
integration host factor subunit beta
Organism
rpt
Rhodopseudomonas palustris TIE-1
Brite
KEGG Orthology (KO) [BR:
rpt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rpt03032
]
Rpal_0069
03036 Chromosome and associated proteins [BR:
rpt03036
]
Rpal_0069
03400 DNA repair and recombination proteins [BR:
rpt03400
]
Rpal_0069
DNA replication proteins [BR:
rpt03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
Rpal_0069
Chromosome and associated proteins [BR:
rpt03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
Rpal_0069
DNA repair and recombination proteins [BR:
rpt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
Rpal_0069
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
HU-CCDC81_euk_2
HU-CCDC81_bac_2
HU-DNA_bdg
HU-CCDC81_bac_1
Motif
Other DBs
NCBI-ProteinID:
ACE98631
UniProt:
B3Q602
LinkDB
All DBs
Position
73414..73728
Genome browser
AA seq
104 aa
AA seq
DB search
MIKSELVQRIAEHNPHLYQRDVENIVNAILDEIVDALARGDRVELRGFGAFSVKHRPARA
GRNPRTGAHVPVDQKTVPFFKTGKEMRERLNRDSGDDAPTSDTA
NT seq
315 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaatccgaactcgttcagcgtatcgccgagcacaacccgcacctgtatcagcgg
gacgtcgagaacatcgtcaacgcgatcctcgatgagatcgtcgacgcattggcgcgtggg
gatcgggttgagcttcgcggctttggcgcattctcggtgaagcatcgtccggcacgcgcc
ggacgcaatccgcgcaccggggctcatgtgccggtcgatcagaagaccgtgccgtttttc
aagaccggcaaggaaatgcgtgagcgcctgaaccgcgacagcggcgacgacgccccaacc
agcgatacagcgtaa
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