Rhodopseudomonas palustris TIE-1: Rpal_0251
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Entry
Rpal_0251 CDS
T00722
Name
(GenBank) Diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
rpt
Rhodopseudomonas palustris TIE-1
Pathway
rpt00300
Lysine biosynthesis
rpt00470
D-Amino acid metabolism
rpt01100
Metabolic pathways
rpt01110
Biosynthesis of secondary metabolites
rpt01120
Microbial metabolism in diverse environments
rpt01230
Biosynthesis of amino acids
Module
rpt_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
rpt00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Rpal_0251
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Rpal_0251
Enzymes [BR:
rpt01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
Rpal_0251
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
DUF2924
HpcH_HpaI
Motif
Other DBs
NCBI-ProteinID:
ACE98811
UniProt:
B3Q862
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All DBs
Position
266937..267818
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AA seq
293 aa
AA seq
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MSALDNRLFAKMNGIGNEIVVVDLRDQPAPVTPADARAVAAHVPYDQLMLLQPARLPGTE
AFVRIYNNDGSESGACGNGMRCVARQMFAGSDKNGLTFETRAGLLNCWRGPADGLYTVDM
GEPKFGWQDIPLAEEFRDTRMIELQIGPIDAPVLHTPSVVSMGNPHAIFWVDDVNAYDLG
RFGPLLENHPIFPERANITLAHIVDRQHITMRTWERGAGLTKACGSAACATAVAAARLKR
TDRTVEMTLPGGQLTIEWRDNDNHVLMTGGAEFEFEGRFDPALFAGALDPTGA
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcgctggataaccgcctgttcgccaagatgaacggcatcggcaacgagatcgtg
gtggtcgacctgcgcgatcagccggcgccggtgacgccggccgatgcgcgggcggtggcg
gcgcacgtgccctacgatcagctgatgctgctgcaaccggcgcggctgcccggcaccgaa
gccttcgtccggatctacaacaatgacggctccgaatccggcgcctgtggtaacggcatg
cgctgcgtcgcgcggcaaatgtttgcaggcagcgacaagaacggcctgaccttcgagacc
cgcgccggcctgctcaattgctggcggggcccggccgacggcctctacaccgtcgacatg
ggtgagccgaagttcggctggcaggacatcccgctcgccgaggaattccgcgatacccgg
atgatcgaactgcagatcggcccgatcgacgcgccggtgctgcatacgccgtcggtggtc
agcatgggcaatccgcacgcgatcttctgggtcgacgatgtgaacgcctacgatctcggc
cggttcggaccgctgctcgagaaccacccgatcttccccgagcgcgccaacatcacgctc
gcccacatcgtcgaccgtcagcacatcaccatgcggacctgggaacgcggcgccgggctg
accaaggcgtgcggctctgccgcatgcgccactgctgtcgcggcggcgcggctgaagcgc
accgaccggactgtcgagatgacgctgccgggcggccaactcaccatcgagtggcgcgac
aacgacaatcacgtgctgatgaccggcggcgccgaattcgagttcgaaggccggttcgac
ccggcactattcgccggcgcgctcgacccgactggcgcctga
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