Rhodopseudomonas palustris TIE-1: Rpal_0284
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Entry
Rpal_0284 CDS
T00722
Name
(GenBank) exodeoxyribonuclease III Xth
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
rpt
Rhodopseudomonas palustris TIE-1
Pathway
rpt03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rpt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Rpal_0284
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rpt03400
]
Rpal_0284
Enzymes [BR:
rpt01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
Rpal_0284
DNA repair and recombination proteins [BR:
rpt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
Rpal_0284
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
ACE98844
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All DBs
Position
304067..304879
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AA seq
270 aa
AA seq
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MRLTLTTWNINSVRLRIDLVAKFLKAQRPDILCLQETKCPDDAFPLKRFKRLGYEHVALN
GQKGYHGVAVISKLPFVTTDIRTFCDIIDSRHISVSVKTDENAPPLVLHNFYVPAGGDIP
DPAVNPKFKHKLSFLDEMKACEPLHPSGDQRHILVGDLNVAPHEHDVWSHKQLLKVVSHT
PVECEKLLAVLRAGNWVDVARERIPLDQKVYTWWSYRAADWTVGDRGRRLDHIWVSEALK
DRVVDFKVLRDARSWERPSDHVPVTMTMEL
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctcacgctcacgacttggaacatcaactcggtgcggcttcgcatcgatctggtg
gcgaaattcctcaaagcccagcgcccggacatcctgtgcctgcaggagacgaagtgtccg
gacgatgcgtttccgctgaagcggttcaagcgactcggctacgagcatgtcgcgctcaac
ggacagaagggctatcacggcgtcgcggtgatttcgaaactgccgttcgtcaccaccgac
atccgcaccttctgcgacatcatcgacagccgccacatctcggtctcggtgaagaccgac
gagaacgcgcctccgctggtactgcacaatttctacgttccggccggcggtgatattccc
gacccagccgttaatccgaagttcaagcacaagctgtcgtttctcgacgaaatgaaagcc
tgcgagccgctgcatccgtccggcgatcagcggcacattctggtcggcgacctcaacgtg
gcgccgcacgagcacgacgtctggtcgcacaaacaacttctcaaggtcgtgtcgcacacc
ccggtggagtgcgagaagctgctcgcggtgctacgcgccggcaactgggtcgacgtcgcg
cgcgagcggatcccgctcgatcagaaggtctatacatggtggagctatcgggctgccgat
tggaccgtcggcgaccgcggccggcggctcgaccacatctgggtctcggaagcgctgaag
gaccgcgtggtcgacttcaaggtcctgcgcgacgcgcgaagctgggagcggccgagcgac
catgtcccggtgacgatgacgatggagctgtag
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