Rhodopseudomonas palustris TIE-1: Rpal_0353
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Entry
Rpal_0353 CDS
T00722
Name
(GenBank) DNA mismatch endonuclease Vsr
KO
K07458
DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
Organism
rpt
Rhodopseudomonas palustris TIE-1
Brite
KEGG Orthology (KO) [BR:
rpt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rpt03400
]
Rpal_0353
DNA repair and recombination proteins [BR:
rpt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
Rpal_0353
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Vsr
DUF559
MTES_1575
HTH_39
RAP
Motif
Other DBs
NCBI-ProteinID:
ACE98913
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All DBs
Position
373661..374077
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AA seq
138 aa
AA seq
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MTSPGFEKPTDPARSALMRRVRQTGTKAEDEVAAILRQSGLRFRRNVKSLPGSPDFANKT
NQWAIFVHGCFWHRHEGCPRTTTPTRNRDFWLAKFAANVNRDTIKARLLRAMGFKVLTIW
ECETRNPSNVRRRLQRLR
NT seq
417 nt
NT seq
+upstream
nt +downstream
nt
atgacgtctcctggctttgaaaagcccacggacccggcccgctccgcattgatgcggcgc
gtccgtcagacaggtaccaaggccgaagacgaggtggcagcgatcctccgtcaatccggt
ttgcgttttcgccgcaacgtcaaatctttgccggggtcgcccgatttcgccaacaagacc
aaccaatgggcgatattcgtccatgggtgcttctggcatcgtcacgaagggtgtcctcgc
accacgacgccgacccggaatcgggatttttggctcgccaagttcgcagctaatgtgaac
cgagacacaatcaaagcgcgattgctgcgcgcgatggggttcaaggttttgacgatctgg
gagtgcgaaactcgcaatccctccaatgtgcgccgccggctgcaaaggttgcgatag
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