Rhodopseudomonas palustris TIE-1: Rpal_0438
Help
Entry
Rpal_0438 CDS
T00722
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
rpt
Rhodopseudomonas palustris TIE-1
Brite
KEGG Orthology (KO) [BR:
rpt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rpt03016
]
Rpal_0438
Enzymes [BR:
rpt01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Rpal_0438
Transfer RNA biogenesis [BR:
rpt03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Rpal_0438
Prokaryotic type
Rpal_0438
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
ACE98998
LinkDB
All DBs
Position
complement(471506..472606)
Genome browser
AA seq
366 aa
AA seq
DB search
MTVTTPDALLAPHDVQHAGADESAAQIRKPRDNKDPRNANRGGGNGKPRRDKRDVHGWVV
LDKPIGMTSTQAVAVLKRLFSAKRAGHAGTLDPLASGGLPIAMGEATKTVPFVMDGRKRY
RFTVAWGEERDTDDTEGRAVATSPDRPTAEAIRALLPRFTGVIEQVPPQYSAVKIQGERA
YDLARDGEVVPLVPRPVEIHELTLVEHGDDGRSVFEAECGKGTYVRALARDMGRLLGCYG
HICALRRTVVGPFDESDMIPLEELQALCDRAASGEGSLADALLPVETALDDIPALAVTRA
DAARLHRGQAVLLRGRDAPHCSGTVYVTVAGRLLALAEVGNGELIPKRVFNLTGLTASSA
VRKESI
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtgaccacccccgacgccctgctcgccccgcacgacgtgcagcacgccggcgcc
gacgaatccgccgcgcagatccgtaagccgcgcgacaacaaggacccgcgcaatgccaat
cgcggcggcggcaatggcaagccgcgccgcgacaagcgcgacgtccacggctgggtggtg
ctggacaagccgatcggcatgacctcgacccaggcggtcgcggtgctgaagcggctgttc
tcggccaagcgcgccggccatgccggtaccctcgatccgctggcctccggcggcctgccg
atcgcgatgggcgaagccaccaagacggtgccgttcgtgatggacggccgcaagcgctac
cgcttcaccgtggcttggggcgaggaacgggataccgacgacaccgagggccgcgcggtc
gcgaccagcccggatcggccgaccgccgaggcgatcagggcgctgctgccgcgctttacc
ggcgtgatcgagcaggttccgccgcaatactcggccgtgaagatccagggcgagcgcgcc
tacgacctggcacgcgacggcgaggtcgtgccgctggtcccgcgtccggtcgagattcac
gaattaacccttgtggaacatggagatgacggccgctcggtgttcgaggccgagtgcggc
aagggaacctatgtgcgggcgctcgcccgtgacatgggccggctgctcggctgctacggt
catatctgcgcgctgcgccgcaccgtggtggggccgttcgacgagtcggacatgattccg
ctggaagaactacaggctttgtgcgatagagcggcgtccggcgagggtagcctcgccgac
gcgctactgcccgttgagaccgcgctggacgacatcccggcactggccgtcactcgggct
gatgcggcaaggctccatcggggccaggccgttttgttgcgcggacgggatgcgcctcat
tgtagcggcacagtctatgtcacggtggcaggccggcttctggccctcgccgaagtcggc
aatggcgagctcatccccaagcgcgtgttcaacctcaccgggctgactgccagctcggcc
gttcgcaaggaaagtatctga
DBGET
integrated database retrieval system
