Rhodopseudomonas palustris TIE-1: Rpal_0473
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Entry
Rpal_0473 CDS
T00722
Name
(GenBank) Carbohydrate-selective porin OprB
KO
K16080
high affinity Mn2+ porin
Organism
rpt
Rhodopseudomonas palustris TIE-1
Brite
KEGG Orthology (KO) [BR:
rpt00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rpt02000
]
Rpal_0473
Transporters [BR:
rpt02000
]
Other transporters
Pores ion channels [TC:
1
]
Rpal_0473
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OprB
OMP_b-brl
OMP_b-brl_2
OmpA_membrane
Motif
Other DBs
NCBI-ProteinID:
ACE99033
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All DBs
Position
509782..511851
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AA seq
689 aa
AA seq
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MIVRRRPARPTSARRDFGSRELSTPHNRISLRPSASALIAGAATAAALLLPQGAAAGGIG
KQRPDPAYDWSGFYVGAHAGYVRGHAGATLQDATSVAQNSNGAGGITAGAQAGYNFVTGS
NLLLGVEADISFPSYLPQNAVLSEFDNGTANTLQHLDYYGTVRARLGVIAGRWLGYVTGG
LAFEHERYLTDPDAGRVMNARIGWAAGAGVEYGFAPNWSVRIEYLYSQYQNASVDLPTGA
SYATSLNLQTVRVGVNRKIDWFSTGSTDAFPSLAAVADPESDRWEIHGQTTFIGQGYPSF
RAPYSGTNSLFPGAQFKNTWSTSLFANVRLWDGGELYFNPEFLQGYGLSDTVGAGGFPNG
EAQKSGFAYPHFSPSRFYLRQTFGLGGEQEQLASSGSQLSGKADISRLTLQVGRFSVIDV
FDGNSYAHDPRRDFMNWSIWASGAFDYAADKLGLGYGATAELNQKQWAIRAGYFLVDAES
NSNNYDMKLLRRGEYVAELETRYSLFGLPGKLRTLGFINSTYSGSYRETLNDPSLNLDIT
QTRRGRIKYGYALNLEQAVTDDIGVFGRWSWNDGKNEIMAFTDIDSSLSGGVSIRGQRWG
RPDDVIGIAGALNGLSRDHRDFLAAGGLGPLIGDGALNYRRERVFESYYALALNSSWTAT
ADYQLIANPAYNADRGPVSVFSGRVHGEF
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atgattgttcgacgacgccccgcccgcccgacttcggcccgccgcgacttcggctcgcgt
gagctatccacgccgcacaatcggatctctctgcgtccgtccgcctcggcgctgatcgcc
ggcgcggcgaccgccgcagctttgctgctgccgcagggcgccgccgcgggcggcataggc
aagcagcggccggacccggcgtacgactggagcgggttctatgtcggcgcccacgcgggt
tacgtccgcggccatgccggcgcgacgctgcaggacgcgacgtcggtcgcgcagaacagc
aacggcgctggcggcatcaccgcgggcgcccaggcgggctacaatttcgttaccggatcg
aacctgctgctcggcgtggaggccgacatctcgtttccgagctatctgccgcagaatgcg
gtgctgtcggagttcgataacggtaccgccaatacgctgcagcacctcgactattacggc
accgtccgcgcccggctcggcgtcattgccggccgttggctcggctatgtcaccggtggc
ctcgccttcgagcacgagcgctacctcaccgatcccgatgccggccgcgtgatgaatgct
cggatcggctgggccgcaggtgcgggcgtcgaatacggcttcgcgccgaactggagcgtg
cggatcgaatatctctacagccaataccagaatgcgagcgtcgatctgccgaccggggcg
agctacgccacgtcgctgaatctgcagaccgtccgggtcggcgtgaaccgcaagatcgat
tggttcagcaccggcagcacagacgccttcccgtcgctcgcggcagtcgccgatccggag
tccgaccgctgggagatccacggccagaccactttcatcgggcagggctacccgtcgttc
cgggcgccgtatagcggcaccaacagtctgtttcccggcgcgcagttcaagaacacctgg
agcaccagcctgttcgccaacgtccggctgtgggacggcggcgaactctatttcaaccct
gaattcctgcagggctacgggctcagcgacacggtgggggccggcggcttcccgaatggc
gaagcgcagaaatccggcttcgcctacccgcatttcagcccgtcacggttctatctgcgc
cagaccttcgggctcggcggcgagcaggaacagctcgcgtcgagcggttcgcagctctcc
ggcaaggccgacatctcgcggctgacgctgcaggtcggccgcttcagcgtcatcgacgtg
ttcgacggcaactcttacgcgcacgatccgcgccgcgatttcatgaactggtcgatctgg
gcgtcgggcgcgttcgactacgcggccgacaagctcggcctcggctatggcgccaccgcc
gaactcaaccagaaacaatgggcgatccgcgccggctacttcctggtcgatgctgaatcc
aactcgaacaattacgacatgaagctgctcaggcgcggtgaatacgtcgccgagctcgag
acccgctattcgctgttcggccttcccggcaagctgcgcacgctgggcttcatcaacagc
acctattcggggagctatcgcgagacgctcaacgatccgtcgctgaacctcgacatcacc
cagacccgccgcggccggatcaaatacggctatgcgttgaatctggagcaggcggtcacc
gacgacatcggcgtgttcggacgctggagctggaacgacggcaagaacgagatcatggcg
ttcaccgatatcgacagcagcctgtcgggcggcgtgtcgatccgcggccagcgctggggc
aggccggacgacgtgatcggcattgccggcgcgctcaacggcttgtcgcgcgatcatcgc
gatttcctcgccgccggcggcctcggcccgctgatcggcgacggcgctctcaactatcgc
cgcgagcgtgtgttcgagagttactacgcgctggcgctcaattcgtcgtggaccgcgacc
gccgactaccagctgattgccaaccccgcctacaacgccgaccgcggcccggtctcggtg
ttctctggccgggtgcacggggagttctga
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