Rhodopseudomonas palustris TIE-1: Rpal_0619
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Entry
Rpal_0619 CDS
T00722
Name
(GenBank) DNA polymerase III, subunits gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
rpt
Rhodopseudomonas palustris TIE-1
Pathway
rpt03030
DNA replication
rpt03430
Mismatch repair
rpt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rpt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Rpal_0619
03430 Mismatch repair
Rpal_0619
03440 Homologous recombination
Rpal_0619
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rpt03032
]
Rpal_0619
03400 DNA repair and recombination proteins [BR:
rpt03400
]
Rpal_0619
Enzymes [BR:
rpt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Rpal_0619
DNA replication proteins [BR:
rpt03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Rpal_0619
DNA repair and recombination proteins [BR:
rpt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Rpal_0619
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_gamma3
DUF3646
DNA_pol3_delta2
DNAX_ATPase_lid
AAA
AAA_22
AAA_30
AAA_16
RuvB_N
AAA_5
AAA_14
AAA_18
AAA_19
TsaE
RCF1-5-like_lid
Rad17
AAA_2
TraI_hel_assoc_N
AAA_24
SRP54
nSTAND3
SKI
AAA_28
AAA_assoc_2
CbiA
RNA_helicase
AAA_33
Motif
Other DBs
NCBI-ProteinID:
ACE99178
LinkDB
All DBs
Position
673248..675119
Genome browser
AA seq
623 aa
AA seq
DB search
MSDSGLSATPPAAPEQPVSASAPAGAYRVLARKYRPNSFDDLIGQEAVVRTVSNAFDTGR
IPQAWILTGVRGVGKTTTARILARALNYELPDGSVKGPTIHMPVHGVHCKAIMESRHMDV
LEMDAASHTGVDDVRQINDSVRYAPASARYKVYIIDEVHMLSTAAFNAFLKTLEEPPEHA
KFVFATTEIRKVPVTVLSRCQRFDLRRVEADVLMNHLSNIAQKEGVEVEPEALGIVARAA
EGSVRDSLSLFDQAIAHAAGVVRADAVRQMLGLADRTRVIELFDALARGDIAAAFAEFRD
QYDTGADPVVVLSDLAEFVNFVTRVKIVPAIADNVAFGETERVRGREFATKLSMRVLSRM
WQMLLKGIAEVQGATRPAAAAEMVLVRIAYAADLPTPDEALRMLEQSGGGDAPAISGGGG
SSSRGGASASLAPAPALSAPSAAMPRSAPTMSAGPAPTMLRGGPDGAARSPVSAPAPAPE
PPALKITTFPQLVALASEKRDVMTRLALEADVRLVRIEDGRLELALEPSASRSLINDLGR
KLEQWTGRRWTVIVSNAPGEPTLRQQSMAQQNERERAAENDPRVQEVLARFPGAKLTVRR
LAPEPVEIESDMDDPSERIDDDD
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgagtgactctggcctttccgcgacgccgcccgctgctcctgagcagccggtcagcgcg
agcgcgccggccggtgcctatcgggtgctggcgcggaaatatcgccccaacagcttcgac
gatctgatcggccaggaagcggtggtgcgcaccgtctccaacgcgttcgataccggacgg
attccgcaggcctggattctcaccggcgttcgcggcgtcggcaagaccaccaccgcgcgc
atcctcgcccgggcgctgaattacgaactgccggatggttcggtgaaggggccgaccatc
cacatgccggtgcatggcgtgcactgcaaggcgatcatggaaagccggcacatggacgtg
ctggagatggacgccgcctcgcacaccggcgtcgacgacgtccgccagatcaacgatagc
gtgcgctacgcgccggcctccgcgcgctacaaagtgtacatcatcgacgaagtccacatg
ctgtcgacggcggcgttcaacgccttcctgaagacacttgaggagccgccggagcacgca
aaattcgtgtttgccaccaccgagatccggaaagtgccggtgacggtgctgtcgcgctgc
cagcgtttcgacctgcgccgggtcgaagccgatgtgttgatgaaccatctgtcgaacatc
gcccagaaggaaggtgtcgaggtcgagccggaagcgctcggcatcgtcgcccgcgccgcc
gaaggctcggtgcgcgattcgctgtcgctgttcgaccaggccatcgcgcatgccgcgggg
gtggtgcgggcggacgccgtgcggcagatgctcggcctcgccgaccgcacccgtgtgatc
gaactgttcgacgcactggcgcgcggcgatatcgcagccgccttcgctgaattccgcgac
cagtacgacaccggtgccgatccggtcgtcgtgctgtccgatctcgccgagttcgtcaat
ttcgtcacccgcgtgaagatcgtgccggcgatcgccgacaacgttgcgttcggtgagacc
gagcgggtgcgcgggcgtgagttcgccaccaagctgtcgatgcgggtgctgtcgcggatg
tggcagatgctgctgaagggcatcgccgaggtgcagggagcgacccgcccggcggccgcc
gccgaaatggtgctggtgcggatcgcctatgcggcagacctgccgacgcccgatgaagcg
ctgcggatgttggagcagagcggtggcggcgatgcgccggccatctcaggcggtggtggc
agcagcagtcgcggcggtgcgtccgcttcgctggcgccggccccggctttatccgctccc
agtgcggcgatgccgcgtagcgcaccgaccatgagcgccggccctgcgccgaccatgctg
cgcggcggccccgacggtgcggcgcgttcgccggtcagcgcgccggcgccagcgcccgaa
ccaccggcgctgaagatcacgacgtttccgcaactcgtcgcgctggcttccgagaagcgc
gacgtgatgactcggctagcgctcgaagccgatgtgcggctggtgcggatcgaggacgga
cggctcgaactggcgctggagccgagcgcatcgcgcagcctgatcaacgatctcggccgc
aagctcgaacaatggaccggacggcgctggaccgtgatcgtctccaacgcgccaggcgag
ccgacgctgcgccagcagagcatggcgcagcagaacgaacgcgagcgtgcggcagagaac
gatccgcgagtccaggaagtgctggcgcgatttcccggcgccaagctgacggtgcggcgc
ctcgcccccgagccggtggagatcgagtctgatatggacgatccctccgagcgaatcgac
gacgacgattag
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