Rhodopseudomonas palustris TIE-1: Rpal_0887
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Entry
Rpal_0887 CDS
T00722
Name
(GenBank) 3-hydroxyacyl-CoA dehydrogenase NAD-binding
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
rpt
Rhodopseudomonas palustris TIE-1
Pathway
rpt00071
Fatty acid degradation
rpt00280
Valine, leucine and isoleucine degradation
rpt00310
Lysine degradation
rpt00362
Benzoate degradation
rpt00380
Tryptophan metabolism
rpt00410
beta-Alanine metabolism
rpt00640
Propanoate metabolism
rpt00650
Butanoate metabolism
rpt00907
Pinene, camphor and geraniol degradation
rpt00930
Caprolactam degradation
rpt01100
Metabolic pathways
rpt01110
Biosynthesis of secondary metabolites
rpt01120
Microbial metabolism in diverse environments
rpt01200
Carbon metabolism
rpt01212
Fatty acid metabolism
Module
rpt_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
rpt00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
Rpal_0887
00650 Butanoate metabolism
Rpal_0887
09103 Lipid metabolism
00071 Fatty acid degradation
Rpal_0887
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
Rpal_0887
00310 Lysine degradation
Rpal_0887
00380 Tryptophan metabolism
Rpal_0887
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
Rpal_0887
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
Rpal_0887
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
Rpal_0887
00930 Caprolactam degradation
Rpal_0887
Enzymes [BR:
rpt01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
Rpal_0887
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
Rpal_0887
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
Rpal_0887
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
ECH_2
3HCDH
DAO
UDPG_MGDP_dh_N
NAD_binding_2
FAD_binding_3
F420_oxidored
NAD_binding_8
Pyr_redox_2
NAD_Gly3P_dh_N
ApbA
GIDA
2-Hacid_dh_C
Pyr_redox
Sacchrp_dh_NADP
TrkA_N
Motif
Other DBs
NCBI-ProteinID:
ACE99444
LinkDB
All DBs
Position
946609..948825
Genome browser
AA seq
738 aa
AA seq
DB search
MAFKNFKVETDADGIALVTWDLPGKSMNVLDAATIEELGAIAEATTKDTAVKGVVITSAK
DAFCAGADLSMLESMNQQFAQIRKDKGEEAAQKMLFDESRKLSQILRGIETCGKPWVAAI
NGLALGGGFEVTLACHYRVAADNPKTRLGLPEIKVGLFPGGGGTQRIPRIVDPQSAMTIL
LKGDQIKLDKAKALKLVDAVVPAADLIKTAKDWIKNGGKAVALWDEKGFKLPGGQVFSKQ
GMMMFPAGNAIYRRETYDNYPAARAIMSCVYEGLLVPIDVALRIESRYFAHVLQTKEAAA
MIRSLFLSMQELNKGARRPQGVPPTKVKKLAIIGAGFMGASVGYVSAKAGIEVVLIDRDQ
ESADKGKAHCQSVIDGLIKKGRAKEADRDALMSRITATPDFNAISDCDLVIEAVFEDRKV
KAETYAKAQPLLKEGAIFASNTSTLPINSLAEEFKDQSKFIGIHFFSPVEKMMLVEVILG
NNTSDVTLATALDYTRQIGKTPIVVNDSRGFFANRCVLRFTAEGLEMLMEGVPAPMIETA
AKMAGMPVGPLSLADEVALDLILKIMKATEADLGEQAVDQQQKKLMVELVEKQGRFGRKN
AKGFYVYPEKGKGQKSLWDGIAALQPKHLDPDTIDVEELKQRFLAVQAVEAARTVEDNVI
VDPREADVGSILGFGFAPFTGGTLSYIDFMGTKEFVALCHKLEGKYGSRFTPPKLLEDMA
KTGDTFYHRFAPKKQAAA
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atggccttcaagaacttcaaagtcgagaccgacgccgacggcatcgcactggtgacctgg
gacctgcccggcaagtcgatgaacgtgctggacgctgcaacgatcgaggaactcggtgcg
atcgcggaagccaccaccaaggacacggcggtcaagggcgtggtgatcacctcggccaag
gacgcgttttgcgccggcgccgatctgtcgatgctggaaagcatgaaccagcagttcgcc
cagatccggaaagacaagggtgaagaagccgcccagaagatgctgttcgacgagagccgc
aagctgtcgcagatcctgcgcggcatcgagacctgcggtaagccgtgggtcgcggcgatc
aatggactggcgcttggcggcggcttcgaagtcacgctggcctgccactatcgcgtcgca
gccgacaatccgaagacccggctcggcctgcccgagatcaaggtcggcctgttcccgggc
ggcggcggtacccagcggattccgcgcatcgtcgatccgcagagcgcgatgacgatcctg
ctcaagggcgatcagatcaagctcgacaaggccaaggcgctgaagctggtcgacgcggtg
gtgccggcggccgatctgatcaagactgccaaggactggatcaagaacggcggcaaggcg
gtggcgctgtgggacgagaagggcttcaagctgcccggcggccaggtgttctccaagcag
ggcatgatgatgttcccggccggcaacgccatctatcgccgcgagacctacgacaactat
ccggccgcgcgcgcgatcatgagctgcgtctatgagggcctgttggtgccgatcgacgtc
gcgctgcggatcgagtcgcgctacttcgcgcacgtgctgcagaccaaggaagcggcggcg
atgatccgcagcctgttcctgtcgatgcaggagctgaacaagggcgcgcgccgtccgcag
ggtgtgccgcccaccaaggtcaagaagctcgccatcatcggcgctggcttcatgggcgcc
agcgtcggctacgtctcggccaaggccggcatcgaggtggtgctgatcgatcgcgaccag
gagagcgccgacaagggcaaggcacattgccagtcggtcatcgacggtctcatcaagaaa
ggccgcgccaaggaagccgaccgcgacgcgctgatgtcgcgcatcactgcgacgccggac
ttcaatgcaatctcggattgcgacctcgtcatcgaagcggtgttcgaggatcggaaagtg
aaggccgagacctacgccaaggcccagccgctgctcaaggaaggcgcgatcttcgcgtcg
aacacctcgacgctgccgatcaattcgctggccgaggagttcaaggaccagtcgaagttc
atcggcatccacttcttctcgccggtcgagaagatgatgctggtcgaagtgatcctcggc
aacaacaccagcgacgtcacgctggcgaccgcgctcgactacacccgccagatcggcaag
accccgatcgtggtgaacgacagccgcggcttcttcgccaaccgctgcgtgctgcgcttc
accgccgagggccttgagatgctgatggaaggcgtcccggcgccgatgatcgagaccgcg
gccaagatggccggcatgccggtcggcccgctgtcgctggccgacgaagtggcgctcgat
ctgatcctgaagatcatgaaggcgaccgaagcggatctcggcgaacaggcggtcgatcag
cagcagaagaagctgatggtcgagctggtcgagaagcagggcaggttcggccgcaagaac
gccaagggcttctacgtctatccggagaagggcaaggggcagaagagcctgtgggacggc
atcgccgcgctgcagccgaagcacctcgatcccgatacgatcgatgtcgaagagctgaag
cagcgcttcctggctgtgcaggcggtggaagcggcccgcacggtcgaggacaacgtcatc
gtcgacccgcgcgaggccgatgttggctcgatcctcggcttcggcttcgcgccgttcacc
ggcggcacgttgagctacatcgacttcatgggcaccaaggagttcgtggcgctgtgccac
aagctcgagggcaaatacggctcgcgcttcactccgccgaagctgctcgaagacatggcc
aagaccggcgataccttctaccaccgcttcgccccgaagaagcaggcggcggcgtag
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