Rhodopseudomonas palustris TIE-1: Rpal_0938
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Entry
Rpal_0938 CDS
T00722
Name
(GenBank) Ornithine decarboxylase
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
rpt
Rhodopseudomonas palustris TIE-1
Pathway
rpt00330
Arginine and proline metabolism
rpt00480
Glutathione metabolism
rpt01100
Metabolic pathways
rpt01110
Biosynthesis of secondary metabolites
rpt04148
Efferocytosis
Module
rpt_M00134
Polyamine biosynthesis, arginine => ornithine => putrescine
Brite
KEGG Orthology (KO) [BR:
rpt00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
Rpal_0938
09106 Metabolism of other amino acids
00480 Glutathione metabolism
Rpal_0938
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
Rpal_0938
Enzymes [BR:
rpt01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
Rpal_0938
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
ACE99495
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Position
complement(996477..997619)
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AA seq
380 aa
AA seq
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MTERIREFLRDRRAKGLDVEPCLVVDLEVVRDNFMHFAKALPDSRVFYAIKANPAPEVLS
LLASLGSCFDCASVQEIQMALAAGATPDRISFGNTIKKERDIARAYELGIRLFSVDCTPE
VEKVARAAPGSKVFCRILYDCAGAEWPLSRKFGCDPEMAVDVLDNAKRLGLEAYGISFHV
GSQQRKVKAWDRALAMAAQVFRDCAERGISLSMVNMGGGFPTKYLKEVPPVVQYGRSIFR
ALRKHFGNQIPETIIEPGRGMVGNAGVIETEVVLISKKSDEDDVRWVYLDIGKFGGLAET
MDESIRYAIKSRHDGAEMTPCVLAGPTCDSADVLYEKMPYPLPVTLEIGDKLLIEGTGAY
TSTYSSVAFNGFPPLATYHI
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaacgtatccgtgaattcctgcgcgaccgccgcgccaagggtctggacgtcgag
ccgtgcctggtcgttgacctcgaagtggtccgcgacaacttcatgcatttcgccaaggcg
ctgccggacagccgcgtgttctatgcgatcaaggccaacccggcgccggaagtgctgtcg
ctgctggcctcgctcggctcgtgcttcgactgcgcctcggtgcaggaaatccagatggcg
ctggccgcgggagcgaccccggaccgcatctcgtttggtaacaccatcaagaaggagcgc
gacatcgcgcgcgcctacgagctcggcatccgcctgttctcggtcgactgcactcccgag
gtggagaaggtcgcgcgtgcggctcccggctccaaggtgttctgccgcatcctgtacgat
tgcgccggcgccgagtggccgctgtcgcgcaagttcggctgcgatccggagatggcggtg
gacgtgctcgacaacgccaagcgtctcggcctggaagcctatggcatttcgttccatgtc
ggctcgcagcagcgcaaggtgaaggcgtgggaccgtgcgctggcgatggccgcgcaggtg
ttccgcgactgcgccgaacgcggcatctcgctgtcgatggtcaacatgggtggcggcttc
ccgaccaagtatctgaaggaagtcccgccggtggtgcagtacggccgctcgatcttccgg
gcgctgcgcaagcacttcggcaaccagatcccggagaccatcatcgagccgggccgcggc
atggtcggaaacgccggcgtgatcgagaccgaagtcgttctgatctcgaagaagagcgac
gaggacgacgtgcgctgggtctatctcgacatcggcaagttcggcggtctcgccgagacg
atggacgagtcgatccgctacgcgatcaagtcgcgtcatgacggcgccgagatgacgccc
tgcgtgctcgccggcccgacctgcgattcggccgacgtgctgtacgagaagatgccgtat
ccgctgccggtgacgctcgagattggcgacaagctgctgatcgaaggcaccggcgcctat
acgtcgacttactcgtccgtggcgttcaacggcttcccgccgctggcgacctaccacatc
tga
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