Rhodopseudomonas palustris TIE-1: Rpal_1018
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Entry
Rpal_1018 CDS
T00722
Name
(GenBank) (Uracil-5)-methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
rpt
Rhodopseudomonas palustris TIE-1
Brite
KEGG Orthology (KO) [BR:
rpt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rpt03009
]
Rpal_1018
Enzymes [BR:
rpt01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
Rpal_1018
Ribosome biogenesis [BR:
rpt03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Rpal_1018
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
MTS
Methyltransf_25
TRM5-TYW2_MTfase
Methyltransf_31
Cons_hypoth95
Motif
Other DBs
NCBI-ProteinID:
ACE99574
LinkDB
All DBs
Position
complement(1080635..1081876)
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AA seq
413 aa
AA seq
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MIQTLTIDQLGHRGDGVSLSQGGATYVPFALPGETVEAEPVQGHPDRRKLLRVEIPSPDR
VAPFCPHFGVCGGCAIQHLRDEPYRTWKRNLVIETLAQAGIDVPVDPLIDAHGAGRRRIT
LHARRGTHDILKVGFSATASHDIIGIDHCPILDPGLNGALEAAWALAEALTPVGKPLDIQ
VTATENGLDIDVRGSGPLPPKMITSLSQLAEKHKLARLTRHGELVLLRRPPVVAIGKAKV
TLPPGAFLQATALGEQTLAELAMANLGRAKQVADLFCGVGPFVLRLAEKARVFACDSDAP
AVTALQKAAPATSGLKPVKAEARDLFRRPLAPPELRDFDAVLFDPPRQGAQAQATQLAAS
RVPLVIAVSCNATTFARDAKLLIDGGYKLERVIPVDQFKYTPHVELVAVLRKQ
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atgatccaaaccctgacgatcgatcagctcggccaccgcggcgacggcgtcagcctgtcg
caaggcggcgccacttacgtgccgttcgccctgcccggcgaaaccgtcgaggccgaaccg
gtgcagggtcatcccgaccgccgcaaactgctgcgcgtcgagatccccagccccgaccgg
gtggcgccgttctgtccgcatttcggcgtgtgcggcggctgcgcgatccagcatttgcgc
gacgagccgtatcggacgtggaaacgcaacctggtgatcgagacgctggcccaagccggg
atcgacgttccggtcgacccgctgatcgatgcccacggcgccggccgccgccgcatcacg
ctgcatgcccgccgcggcacgcacgacattctcaaggtcggattcagcgccaccgcgagc
cacgacatcatcggcatcgatcactgcccgatcctcgatccggggctgaatggcgcactg
gaagcggcctgggcgctggccgaagcgctgacgccggtcggcaagccgctcgatattcaa
gtcaccgccaccgagaacggcctcgatattgacgtgcgcggctccgggccgctgccgccg
aagatgatcacttcactctcgcaactcgccgagaagcacaagctcgcccggctgacgcgc
cacggtgaattagttctgctgcgccggccgccggtggtggcgatcggcaaggccaaagtg
acgctgccgccgggcgcgttcctgcaggcgacggcgctcggcgaacagacgctggcggag
ctggcgatggcgaatctcggccgcgccaagcaggtcgcggatttgttctgcggcgtcggc
ccattcgtgctgcgtctcgccgaaaaggcgcgagtattcgcctgtgacagcgatgcgccg
gcggtcacggcgctgcagaaggccgcgccggcaacgtcggggctgaagccggtgaaggcc
gaagcgcgcgacctgtttcggcgcccgctggcaccacccgaactccgcgacttcgacgcc
gtgctgttcgatcccccgcgccagggcgcgcaggcgcaggccacgcagctcgcagccagc
cgggtgcctctggtgatcgccgtctcctgtaacgccaccaccttcgcccgcgatgcgaaa
ctgttgatcgatggtggctacaagctcgaacgcgtgatcccggtcgatcagttcaagtac
acgcctcatgtcgaattggtggcggtgttacgaaagcagtag
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