Rhodopseudomonas palustris TIE-1: Rpal_1624
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Entry
Rpal_1624 CDS
T00722
Name
(GenBank) transcriptional regulator, NifA subfamily, Fis Family
KO
K02584
Nif-specific regulatory protein
Organism
rpt
Rhodopseudomonas palustris TIE-1
Pathway
rpt02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
rpt00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Rpal_1624
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rpt03000
]
Rpal_1624
Transcription factors [BR:
rpt03000
]
Prokaryotic type
Helix-turn-helix
Other families
Rpal_1624
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF
GAF_2
HTH_8
AAA_5
AAA
GAF_3
AAA_2
AAA_16
nSTAND3
Parvo_NS1
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
ACF00153
UniProt:
B3Q676
LinkDB
All DBs
Position
complement(1738722..1740407)
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AA seq
561 aa
AA seq
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MPMAQNSRRAPAAPIAPEPPKRLATLDLSGEPEGFVDEFTHCFTGECRVNVLQILFRINQ
VLTQNADLATLVSIILDGMRQQMRMQRGVMMLYDRHSDAIFIHDSFGLTEEERGRGIYAP
GEGITGKVVETGKPIIIPRVIDSPDFLDRTRAHNKGRKQDKLAFFCVPIVLAQKVLGTIC
AERVYMNQRLLNQDAELLAMVASLIAPAVELYLIENVDKVRLETENRRLKSELKQRFRPA
NIIGNSKPMQEVYAMVHKVASTKATVLLLGESGVGKELVASALHYNSPVADGPFIKANCA
ALPEALAESELFGHERGAFTSAIATHKGYFEQASGGTIFLDEVGELSLPTQAKLLRVLQE
RTFERVGGAKPVKVDVRIIAATNRNLAEMVAEGTFREDLFYRLNVFPITIPPLRDRGSDV
ITLADHFVTTYSAEIGKPIKRISTPAINMLMSYHWPGNVRELENVIERSVILAEEGVIHG
YDLPPSLQTPTETGTGFSGTLEDRVTAVEYEMIVEALKASNGNVGQAATTLGLTRRMLGL
RMERHGLTYKTFRTAGLRPRN
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atgccgatggcccaaaattcccgccgagctcctgccgcccccatcgcgcccgagcccccc
aaacgcctcgcgacgctggacctcagcggcgaaccggaaggtttcgtcgacgaattcacc
cactgcttcaccggcgaatgccgggtcaatgtgttgcagatcctttttcgcatcaatcag
gtgctgacgcagaacgctgacctcgccacgctggtgtcgatcattctcgacggcatgcgc
cagcagatgcggatgcagcgcggcgtgatgatgctgtacgatcgccactccgacgcgatc
ttcatccacgacagcttcggactgaccgaggaggagcgcggccgcggcatctacgcgccc
ggcgaaggaatcaccggcaaggtggtcgagaccggcaagccgatcatcatcccgcgggtg
atcgacagcccggactttctcgatcgcacccgcgcccacaacaaggggcgcaagcaggac
aagctggcgttcttctgcgtgccgatcgtgctcgcccagaaggtgctcggcaccatctgc
gccgagcgcgtctatatgaatcagcggctgctgaatcaggatgccgaactgctggcgatg
gtcgcctcgctgatcgcaccggcggtcgagctgtatctgatcgagaacgtcgacaaggtg
cggctggagaccgagaacaggcggctgaaaagcgagctgaagcagcgctttcgcccggcc
aacatcatcggcaactccaagccgatgcaggaagtctacgccatggtgcacaaggtggcc
tcgaccaaggccaccgtgctgctgctcggcgaaagcggcgtcggcaaggagctggtggcg
agcgcgctgcactacaacagcccagtggccgacggcccgttcatcaaggcgaactgcgct
gcgctgcccgaagcgctggcggagagcgagctgttcggccacgagcgcggcgcgttcacc
agcgcgatcgccactcacaagggttacttcgaacaggcatctggcggcacgatctttctc
gacgaggtcggcgaattaagtctaccgacgcaggccaagctgctgcgcgtactgcaggaa
cggacgttcgagcgcgtcggcggcgccaagccggtcaaagtcgatgtccggatcatcgcc
gccaccaaccgcaatctcgccgagatggtcgctgagggcaccttccgcgaagatctgttc
tatcgcctcaacgtcttcccgatcaccatcccgccgctgcgcgatcgcggctcggacgtg
atcaccctcgcggaccacttcgtcaccacctattccgccgaaatcggcaaaccgatcaaa
cggatctcgacgcctgcgatcaacatgctgatgagctatcactggcccggcaacgtccgc
gagctggagaacgtgatcgagcgatcggtgatcctggcggaggaaggcgtgatccacggc
tacgatctgccgccgtcgctgcagacgccgaccgaaaccgggaccggcttcagtggcacg
ctcgaagaccgcgtcacggcagtcgaatacgagatgatcgtcgaggcgctcaaagcctcg
aatggcaatgtcggccaggccgccaccacgctcggcctgacgcggcgaatgctcggcctg
cggatggagcgccacggactgacctacaagacattccgcaccgcagggctgcgcccgcgg
aactga
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