Rhodopseudomonas palustris TIE-1: Rpal_1881
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Entry
Rpal_1881 CDS
T00722
Name
(GenBank) outer membrane autotransporter barrel domain protein
Organism
rpt
Rhodopseudomonas palustris TIE-1
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PATR
Autotransporter
Motif
Other DBs
NCBI-ProteinID:
ACF00407
LinkDB
All DBs
Position
2024496..2029094
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AA seq
1532 aa
AA seq
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MAYKRTRSTDIQVLLAGGSRVGARSIAALSAALLRAITVMTTLTVPAMADGGAGGQGGDS
SAAGGIGGSGYVGASGGSSGPSTTAGSGGGGGGAAGGGSGGSSGNTDSVGGAAGGTTPGQ
DGSNGTTAASPSGGGGGAGGNNGNVATAPFSNAANSTGQNGGKGGNGGAGTDSGSTGGGG
GGGGAGGVGFVFSDSSSFTNFNVTIQGGAGGNGGAGGSAAAANGNGGAGGDGGTGLLLTS
PGATVTNSGTIKGGNGGAAGAAGAGTGTAGAAGAAGAGGTGIVGSGLTIINSGSIQGGLS
GDGTRANSITFTGGNNTLTFMNAGAGLTGAIGLATSSTTLTFAQSTNSTLDQMITGAGSV
TKAGPGVLTLTGLNTYAGGTIIAAGTLQIGDGGTTGSITGRVANGSALSFNRSDTYTLDG
VISGSGRVNQLGPGTTVLTGNNNYSGGTTISAGTLQVGNGGTTGTIGSGNVNNAGILAFN
RSNALNFVPVISGAGAVTQLGSGNLTLSGTNTYTGGTTISSGTVTATTNRALGTGDVRMM
QGATLVLPFNSTLANNFIISGTSILKVESGTTRITGVLSDGPIAGSIEKTGGGVISLTGN
NTYTGGITISAGALDIGANGSTGSITGDVINNGSLRFKRSDAYTFGGAISGRGAILQDGD
GVTILTGTNTYTGTTAISRGKLQIGDGGTTGSITGGVTNNSELWFNRSDTYTFGGVISGS
GRVSQLGPGTTVLTGKSTYTGGTTISAGTLQIGNGGTTGSIANNVNNAGTLAFNRSDAYT
FGGAISGTGSVSQLGSGNLTLSGANTYIGGTTISGGTVTVGNNSAFGTGDVKTTQGATVA
FGAADYTLANNFVVSGTSIFDIQTGTTQTITGAVSDGDTAGIIQKNGDGKLILSGPTSYS
GGTIINAGTLQLANSNMLSATTAATVASGTTLDLGGFNQTIGSLAGAGSVALGAALLTTG
ADNSSTNYSGTMSGTGGLTKQGTGNLILSGTNDYTGPTTVNAGTLSVNGSIASAVTAASG
GRLGGSGSVGSTTIASGGTLAPGNSIGTLTVNGDLTLAAGSSYAVEVSPTASDRTNLTGR
ATLAGTVQASYATGSYISKRYTIVNASGGVAGTFGALVDTNLPANFRSALAYDANNAYLD
LMLAFVPPTAPDYGNGLSRNQQQVAGALVNSFNVAGGIPTTLGTLRPDGLSQASGEAVAA
LQQSLFGSADLFMRSVFSNALDPTDGSAGRECAAPGSQAGPRDACAALPPAAASASRWSV
WGAGYGGTLRVGGDASTGSHDTTSRVAGAAAGASYQVSPQARVGFALGGSGSSFSLAQGL
GSGSSDSFNAALYGRYQLGPSYLAAALGYVWQDATVDRTVTVAGGEALRARMHPQALTAR
VEGGQRRQVSGIGVTPYAALQTTTMFLPTFGETGTSVFALDYAGRQSTVTRSELGARFDD
EVFIDGRPLALRARAAWAHGWNTDWQAAATLRQIPAAQFNVYGAALPGDSVQVSLGASLG
LGRGWTVSAAFDGEFWKHAESYAGRALVSYQW
NT seq
4599 nt
NT seq
+upstream
nt +downstream
nt
gtggcgtacaagcgaacacggtcgactgacatccaggtgttgctggcaggcggcagtcgg
gtcggtgcacggagcattgcggcgctgagtgcggcgctgttgcgcgcgatcacagtcatg
acgaccctgacagtcccggcgatggccgacggcggtgccggcggacaaggcggcgactcc
tccgccgccggtgggatcggcggctctggctatgtcggagcgagcggtggtagctcggga
ccgagcacgaccgcggggtcgggcggcggcggcggcggtgcggccggcggcgggagcggt
ggctccagcggcaatacagacagtgtcggaggtgctgcgggcggcaccacgccggggcaa
gacggcagcaatggcacgacggcggcctcccccagcggaggtggaggaggcgccggcggc
aacaatggcaacgtggccactgctcccttcagcaatgcggcaaactccaccggccaaaat
ggtggcaaaggcggcaacggcggtgcaggcacagattcaggctccaccgggggtggtggc
ggcggcggcggcgcggggggcgttggtttcgtcttttcggacagcagttccttcaccaat
ttcaatgtgacgattcaaggcggcgccggcggcaatggcggtgccgggggatctgcggct
gcggcaaacggcaatggcggcgcgggcggagacggcgggaccggccttctattgacctca
ccgggggcgacggtcaccaacagcggcaccatcaaaggtggcaatggtggcgccgcaggc
gcagcaggcgccggaacgggcaccgccggggcggcgggggccgctggcgcgggcggcact
gggatcgtcggctccggcctgaccattatcaactccgggtcgattcagggcggcctctcc
ggcgacggaacgcgagcgaactcgattacatttacgggcggcaacaatacgctgacgttc
atgaacgcgggggcgggccttaccggtgcgatcggtctcgcgaccagcagcaccaccctc
acgttcgcacagtcgaccaactcgaccctcgaccagatgatcacaggagcgggctccgtc
acaaaggcgggccctggcgtgctgacgctcaccggcctcaacacctacgcgggcggcacc
atcattgcggctggcacgctgcagatcggcgacggcggcacgaccggatcgatcactggc
agggtggctaacggcagcgcgctgtcgtttaatcgctcagatacctacacgctcgatggc
gtaatctcaggtagtggacgtgtgaaccagctcggtccagggacgacggtcctcacgggc
aacaacaactacagtggcgggaccaccatttcggctggcacgctgcaggtcggcaacggt
ggcaccaccggaacgatcggcagcggaaacgtcaataacgccggtattttggcgttcaat
cgctccaatgctctcaattttgttcctgtgatctctggcgccggcgcggtcactcaactt
ggatccggcaacctgacgctgtcgggtactaacacctacaccggcggaacgacgatcagc
agtggcactgtcacagccaccaccaaccgcgccttgggcaccggcgatgtgaggatgatg
cagggcgcgaccttggtgctcccgttcaactctaccctcgccaataatttcatcatcagt
ggcacctctattctcaaggtggagtctggcaccacccggattacaggcgtcctctccgac
gggcccatcgcagggagcatcgaaaagacaggcggtggtgtgatttccctcaccggcaac
aacacttacacgggggggatcactatctcggccggcgcgttggatatcggcgccaatggc
tccaccggatcgatcaccggcgatgttatcaataacggctctctgcggttcaaacgttcg
gacgcctacacgttcggcggcgctatctctggtaggggagcaatactccaggacggcgac
ggcgtaacgatcctaactggcaccaacacttataccggcaccacggccatttcgcgcggc
aagctgcagatcggcgatggcggcacgaccggatcgatcaccggcggggtgaccaacaac
agcgagctgtggttcaatcgctcagatacctacacgttcggtggcgtaatctcgggtagt
ggacgtgtgagccagctcggtccagggacgacggtcctcacgggcaaaagcacctacacg
ggcggcacaaccatttcggctggcacgctgcagatcggcaacggtggcaccaccggcagt
atcgccaacaatgtcaataacgccggcactttggcgttcaatcgctcagatgcctacacg
ttcggcggcgcgatctccggcaccggctcggtctctcaactgggatccggcaatctgaca
ctgtcgggcgccaacacctacatcggcggaacgacgatcagcggcggcactgtcacggtc
ggcaacaacagcgcttttggcaccggcgatgtgaagacgacgcagggcgcgacggtggcg
ttcggcgccgccgactacaccctcgccaacaattttgtggtcagcggcacctccattttc
gatatccagactggcaccacccagaccattacgggcgctgtctccgacggagacaccgca
gggatcatccaaaagaatggcgacggtaagctgatcttgagcggtcccacttcctattcg
ggcggcaccatcatcaacgccgggacactgcaactggcgaacagcaacatgctgtcggcg
accaccgcggcgacggtcgcctcagggaccactctcgatctcggcggcttcaatcagacc
attggttcgttggcgggagctggatcggtcgcgctcggtgcggcgctgctcacgacgggg
gcggacaacagctcgacgaattattccggaacgatgtcggggaccggggggctgaccaag
caggggaccggaaacctcattctctccggcaccaatgattacaccgggccgaccacggtc
aatgccggcacattgtcggtgaacgggtcgatcgcttcggcggtgaccgcggcgagcggc
ggccggctcggcggctcaggcagcgtcggttcgacgacgattgcatcaggcgggacgctg
gcgcccggcaattcgatcggaactctgacggtcaatggcgatctgaccctcgcggccggc
tcgagctatgcggtcgaggtgtcgccgacggcgtcggatcgcaccaacctcacggggcgt
gccacactcgccggaaccgtgcaggcgagctacgcgaccgggagttacatctccaagcgc
tacaccatcgtcaatgcgagcggcggcgtcgccggaacattcggtgcgcttgtcgacacc
aatctgcctgccaacttcagatcggcgctggcctacgatgccaacaatgcctacctcgat
ctgatgctggcgttcgttcctcccactgcgccggactacggcaatgggttgagccgcaat
caacagcaggtcgctggtgcgctggtcaattcgttcaacgtcgccggtggaatcccgacc
acgctgggcactttgaggccggacgggctgagccaggcttccggcgaagccgtagccgcg
ctgcagcagtcgttgttcggctcggccgatctgttcatgcgcagcgtgttcagcaacgcg
ctcgacccgacggacggctccgctgggcgggagtgcgcggcgcctgggtcccaagccgga
ccgcgcgacgcgtgcgcggcgctgcctcccgcggccgcctcggcgtcgcgctggagcgtc
tggggcgcgggatacggcggcacgctgcgcgtcggtggcgatgcgtccaccggctcgcac
gacaccaccagccgagttgccggtgctgccgcgggcgcaagctatcaggtgtcgccgcag
gcccgtgtcggtttcgcgctgggtggttccggttcgagcttcagcctcgcgcaaggcctc
ggctccggcagctcagacagcttcaacgccgcgctctacggtcgctatcagctcggcccg
tcatatttggcggcggcgctcggctatgtatggcaggacgccactgtcgatcggacagtg
acggttgccggcggggaggcgctgcgcgcccggatgcatccgcaggctctgacggcgcgg
gtcgagggcggtcagcgccggcaggtcagcggcatcggtgtcacgccttatgcggcgctg
cagaccaccacaatgttcctgccgacctttggcgagaccggaacgagtgtgttcgcgctc
gactacgccgggcgccagtcgacggtgacgcgcagcgaactcggggctcgcttcgacgac
gaggtcttcatcgatggacggccgctggcgctgagagcgcgggccgcctgggctcacggc
tggaacacggactggcaggcggcggccacgttgcggcaaatcccggccgcgcagttcaac
gtctatggcgcggcgctgcccggcgattccgtccaggtttcgctgggagcaagtctggga
cttggtcgcggctggaccgtctcggcggcatttgacggtgagttctggaagcacgccgag
agctacgccggccgcgcgctcgtcagctaccagtggtga
DBGET
integrated database retrieval system
