Rhodopseudomonas palustris TIE-1: Rpal_2001
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Entry
Rpal_2001 CDS
T00722
Name
(GenBank) Extracellular ligand-binding receptor
KO
K01999
branched-chain amino acid transport system substrate-binding protein
Organism
rpt
Rhodopseudomonas palustris TIE-1
Pathway
rpt02010
ABC transporters
rpt02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rpt00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Rpal_2001
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Rpal_2001
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rpt02000
]
Rpal_2001
Transporters [BR:
rpt02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
Rpal_2001
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_6
ANF_receptor
Peripla_BP_5
Thioredoxin_8
Motif
Other DBs
NCBI-ProteinID:
ACF00524
LinkDB
All DBs
Position
complement(2164920..2166155)
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AA seq
411 aa
AA seq
DB search
MSSLSRSIAAVAAVALLSATGGQALAQKKYGPGASDTEVKIGNIVPYSGPASAYGSVGRA
QEAYFKMINDKGGINGRKIVYVSYDDAYSPPKAVEQTRKLVESDEVLFMFSPLGTPSNTA
IQKYLNAKKVPHLFLASGATKWNDPKHFPWTMGWLPSYQSEGRIYAKYILKEKPDAKIAV
LYQGDDFGKDYLKGLKDGLGAKVSQVVIEDSYELTEPTVDSHIVKIKAANPDVLVIFATP
KFAAQTIKKVAELAWKPMMIVPNVSASTGSVMKPAGFENAQGIVSAAYAKDATDKQWEND
PGMKAYYEFMAKYAPDASRADSSFTTGYNIAETVAVLIKQCGDDLSRENVMKQAANLKGV
QLGGLLPGVTLNTSPTDFAPIEQLQMMRFEGENWKLFGDVIEGEVAAPSGG
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgtcttccctgtcccgttcgatcgccgccgtcgcggccgtcgcgctgctgtccgccacc
ggcgggcaagcgctggcgcaaaagaaatacggccccggtgcgagcgacaccgaagtcaag
atcggcaacatcgtgccgtattccggccccgcctcggcctatggcagcgtcggccgggcg
caggaagcctacttcaagatgatcaatgacaagggcggcatcaacggccgcaagatcgtc
tacgtgtcatatgacgacgcctattcgccgccgaaggccgtcgagcagacccgcaagctg
gtcgagagcgacgaagtgctgttcatgttctcgccgctcggaacgccgtccaacaccgcg
atccagaagtatctcaacgccaagaaggtgccgcatctgttcctggcgtcgggcgccacc
aagtggaacgatccgaagcacttcccgtggacgatgggctggctgccgagctaccagagc
gaaggtcgaatctacgccaagtacatcttgaaggagaagccggacgccaagatcgccgtg
ctgtatcagggcgacgacttcggcaaggactatctgaagggcctcaaggacggtctcggt
gccaaggtgtcgcaggtcgtgatcgaggacagctacgagctgaccgagccgaccgtcgac
tcccacatcgtcaagatcaaggccgcgaacccggacgtgctggtgatcttcgccacgccg
aagttcgccgcgcagaccatcaagaaggtcgccgagctcgcctggaagccgatgatgatc
gtgccaaacgtctcggcctccaccggcagcgtgatgaagccggccggcttcgaaaacgcg
cagggcatcgtctcggccgcctacgccaaggacgccactgacaagcagtgggaaaatgac
ccgggcatgaaggcgtattacgagttcatggccaagtacgcgccggacgccagccgcgca
gacagctcgttcaccaccggctacaacatcgccgagaccgtggcggtgctgatcaagcag
tgcggcgacgacctcagccgtgagaacgtgatgaagcaggcggcgaacctcaagggcgtg
cagctcggcggcctgctgccgggcgtaacgctgaacacctcgcctaccgacttcgcgccg
atcgagcagctgcagatgatgcggttcgaaggcgaaaactggaagctgttcggcgacgtg
atcgaaggcgaagtcgccgcgccgagcggcggctag
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