Rhodopseudomonas palustris TIE-1: Rpal_2047
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Entry
Rpal_2047 CDS
T00722
Name
(GenBank) protein of unknown function DUF853 NPT hydrolase putative
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
rpt
Rhodopseudomonas palustris TIE-1
Brite
KEGG Orthology (KO) [BR:
rpt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rpt03400
]
Rpal_2047
DNA repair and recombination proteins [BR:
rpt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
Rpal_2047
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HerA_C
DUF87
AAA_22
AAA_30
FtsK_SpoIIIE
AAA_10
Hydrolase
T2SSE
Zot
AAA_16
ResIII
TrwB_AAD_bind
AAA_19
AAA_25
AAA_7
Motif
Other DBs
NCBI-ProteinID:
ACF00570
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Position
2216903..2218513
Genome browser
AA seq
536 aa
AA seq
DB search
MAASGIASGDTEDKIFIGKGEQPAWLTLALANRHGLVTGATGTGKTVSLQVMAEGFARAG
VPVFAADIKGDLSGIAEVGEAKDFILKRAQEIGLKFQPDQFTTVFWDVFGEQGHPVRATV
SEMGPLLLSRMLDLNDVQEGVLNVAFRVADDMGLPLMDMKDLRAMLDAIAPIAQKVADNG
DVNADIRQAAQSLGNVTKQTVGTIQRQLLVLENQGGEKFFGEPALQLKDFIRTDSQGRGL
VNILVADKLMTNPRLYATFLLWMLSELFEELPEVGDPDKPKLVFFFDEAHLLFNDAPKPL
MDKIEQVVRLIRSKGVGVYFITQNPIDVPDRVLAQLGNRVQHALRAFTPRDQKAVAAAAD
TFRPNPRLDTAKAITELGKGEALVSFLEGNGTPAMVERVLVRPPSARIGPITPEERKAII
AASPVRGKYDTAVDSESAYEKLRARIDGKSASEGPAPGEGGILGQLGGLFSTVFGTNTPR
GKLTTGQLVARNVARTVATTVVGGVAAELGKKVGGSLGSSVGRSIVRGTLGGMLRR
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgagcggcatcgcgagcggtgataccgaagacaagatttttatcggtaaaggc
gaacagccggcgtggttgacgttggcgctcgccaatcgtcacggcctggtcaccggcgcc
accggtacaggcaaaacagtgtcgctgcaggtgatggcggaaggctttgcgcgcgccggc
gtaccggtatttgcagccgacatcaaaggcgatctatccggtatcgccgaggtcggcgag
gccaaggacttcatcctcaagcgcgcccaggagatcgggttgaaattccagcctgatcag
ttcaccaccgtgttctgggacgtgttcggcgagcagggccatccggtgcgcgccaccgtt
tccgagatgggaccgcttttgctgtcgcggatgctcgatctcaacgacgtgcaggagggc
gtactcaacgtcgcattccgtgtcgccgacgacatgggcctgccgctgatggacatgaag
gatctgcgtgcgatgctggatgcgatcgcgccgatcgcccagaaggtcgcggacaacggc
gacgtcaacgccgacattcgccaggctgcgcagtcgctcggcaacgtcaccaagcagacc
gtcggcaccatccaacgtcagctgctggtcctggaaaatcagggcggcgagaagttcttc
ggcgagcctgcgctgcagctcaaagacttcatccgcaccgacagccagggccgcggcctc
gtcaatattctggtcgccgacaagctgatgaccaatccgcgtctgtacgcgaccttcctg
ctgtggatgctgtcggaactgttcgaggagctgccggaagtcggcgatcccgacaagccg
aagctggtgtttttcttcgacgaggcgcacctgctgttcaacgacgcgccgaagccgttg
atggacaaaattgaacaggtggtgcggctgatccgctccaagggcgtcggcgtgtacttc
atcacccagaacccgatcgacgtgcccgaccgggtgctggcgcagctcggcaatcgggtg
cagcacgcgctccgtgctttcacgccgcgcgaccagaaggcggtggcggccgcggctgac
accttccggccgaacccgaggctcgatacggccaaggcgatcaccgagctcggcaagggc
gaagcgctggtgtcgttcctcgaaggcaacggcacgccggcgatggtcgagcgcgtgctg
gtgcggccgccgtcggcgcggatcgggccgatcacgccggaggagcgcaaggcgatcatc
gccgcgagcccggtgaggggcaaatacgacaccgcggtggattccgaatccgcctatgag
aagctgcgcgcccggatcgacggcaagtcggcgagtgaaggccctgcaccgggcgagggc
ggcattctcggtcagctcggcgggctgttctcgaccgtgttcggcaccaacacgccgcgc
ggcaagctcaccaccggtcaactcgtcgcccgcaatgtcgcccgcaccgtcgcaaccacg
gtggtcggcggcgtcgccgccgagctcggcaagaaggtcggcggatcgctcggcagctcg
gtcggtcgctcgatcgtgcgtggcacgctgggcggaatgctgcgacggtaa
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