Rhodopseudomonas palustris TIE-1: Rpal_2341
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Entry
Rpal_2341 CDS
T00722
Name
(GenBank) Ornithine decarboxylase
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
rpt
Rhodopseudomonas palustris TIE-1
Pathway
rpt00330
Arginine and proline metabolism
rpt00480
Glutathione metabolism
rpt01100
Metabolic pathways
rpt01110
Biosynthesis of secondary metabolites
rpt04148
Efferocytosis
Module
rpt_M00134
Polyamine biosynthesis, arginine => ornithine => putrescine
Brite
KEGG Orthology (KO) [BR:
rpt00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
Rpal_2341
09106 Metabolism of other amino acids
00480 Glutathione metabolism
Rpal_2341
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
Rpal_2341
Enzymes [BR:
rpt01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
Rpal_2341
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
ACF00856
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Position
2525654..2528011
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AA seq
785 aa
AA seq
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MDYFRRFTFLFSAPTFEADDLEGIRFNQIVAEIERSGFEIVKARKLEDAEIAVQTDAAIG
CMVVDWGKKGLEGKTAALINLMRRRGLDFPIVLLIRRKRFEEVPVEVLDFIDGYVFLSEE
TPTFIARNLISRLKQYADTLKTPFFGALVDYAEEGNQLWTCPGHNGGMFYSRSPIGRVFI
EHLGEAVFRDDLDNSVLDLGDLLTHEGPALRAQKEAAQIFGAEKTYFVLNGTSTSNKVAL
GALVSDGDLILFDRNNHKAAHHGALMMGGGIPVYISTVRNAWGLIGPMAWDALDEEALRE
CIRRHPLVKDSEAWRKPRPFRVAVVEQCTYDGTIHSAEMILRRIGHLCDYILFDEAWAGF
MKFHPLYAGRFAMGLANLGDDAPGIIATQSTHKQLASFSQASQIHIKDRHIRGQKRRVEH
RRFNESFMQHASTSPFYPLFASLDVGAQMMKGRSGEVLWDDTIRLGIELRKKIRAVRREF
EEKEARPERRWFFDPFVPDRVTIADAAREGAVHDVAWEAVSTDQLATDPAFWQIAPGAAW
HGFADMAPGFAMTDPNKLTLLTPGFDRATGRYAEHGVPAPVVAQYLRENRIVPEKNDLNS
LLFLLTPGVEASKAGTLISGLVAFKKLHDDNAPLDEVIPEFSRRRPARYAGVRLRDLCGQ
MHRFFRDADVSALQAKQFLPEHLPEIAMSPHDAARCLVRNDVDYLPISQIAGRIATTPFV
VYPPGIATIVPGERLSERAKPMLDYLQMFERSFNEFPGFEVEIQGVYREFDELGRVRLYT
YVVAE
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atggactacttcaggcgtttcaccttcctgttctcggcaccgaccttcgaagcggatgat
ctcgaaggcattcggttcaatcagatcgtcgcggagatcgagcggtccggcttcgagatc
gtcaaggcgcgcaagctggaagatgccgagatcgcggtgcagaccgacgccgcgatcggc
tgcatggtggtcgactggggcaagaagggcctcgagggcaagaccgccgcgctgatcaac
ctgatgcgccggcgaggcctcgactttccgatcgtgctgctgatccgccgcaagaggttc
gaggaagtgccggtcgaggtgctcgatttcatcgacggctacgtgtttctgtccgaggag
acgccgaccttcatcgcccgcaacctgatcagccggctgaagcaatatgccgacacgctg
aagacgccgttcttcggcgcgctggtcgactatgcggaggagggcaaccagctctggacc
tgccccggccacaacggcggcatgttctacagccgcagcccgatcgggcgggtgttcatc
gagcatctcggcgaggcggtgttccgcgatgacctcgataattcggtgctcgaccttggc
gatctgttgacccacgaggggccggcgctgcgcgcgcagaaggaagccgcgcagatcttc
ggtgccgagaagacctatttcgtgctcaacggcacctcgacctccaacaaggtcgccctc
ggcgcgctcgtctccgacggcgatctgatcctgttcgatcgcaacaatcacaaggcggcc
catcacggcgcgctgatgatgggcggcggcattcccgtctacatttccaccgttcgcaac
gcctggggcctgatcgggccgatggcgtgggacgcactggatgaagaggcgctgcgcgag
tgcatccgccgccatccgctggtcaaggattccgaagcgtggcgcaagccgcgcccgttc
cgcgtcgccgtggtcgaacagtgcacctacgacggcaccatccacagcgccgagatgatc
ctgcgccgcatcgggcatttgtgcgattacatcctgttcgacgaagcctgggccggcttc
atgaagtttcatccgctgtatgccggccgcttcgcgatggggctggcgaacctcggcgac
gatgcccccggcatcatcgcgacgcagtcgacccacaagcagctcgccagtttctctcag
gcgtcgcagatccacatcaaggatcgccacatccgcggccagaaacggcgggtcgagcat
cggcgcttcaacgagagcttcatgcagcacgcctcgacgtcgccgttctatccgctgttc
gcctcgctcgatgtcggcgcgcagatgatgaagggccgctccggcgaagtgctgtgggac
gatacgatccggcttggtatcgagctgcgcaagaagatccgcgcggtgcggcgcgagttc
gaggagaaagaggcgcggcctgagcggcgctggttcttcgatccgttcgtgcccgatcgg
gtgacgatcgcggacgccgcccgtgaaggcgcggtgcacgatgtcgcctgggaggccgtg
agcaccgaccagctcgcgaccgacccagcattctggcagatcgcgccgggtgcggcctgg
cacggctttgccgatatggcgcctggcttcgccatgaccgacccgaacaagctgacgctg
ctgacgccgggcttcgaccgggccaccggccgctatgccgagcacggcgtgccggcgccg
gtggtggcgcaatatctgcgcgagaaccgcattgttccggaaaagaacgatctcaactcg
ctgctgtttctgctgacgccgggcgtcgaggcgagcaaggccggtacgctgatcagcggc
ctcgtcgcgttcaagaagctgcacgacgacaacgcgccgctcgacgaggtgatcccggaa
ttcagccggcgccggcccgcgcgctatgccggggtacggctgcgcgatttgtgcgggcag
atgcaccggttcttccgcgacgccgatgtcagcgcgctgcaggccaagcagtttctgccc
gaacatctacccgagatcgcgatgtcgccgcacgatgcggcgcgctgcctggtccgcaac
gacgtcgactatctgccgatcagtcagatcgcgggccggatcgccaccacgccgttcgtg
gtctatccgccggggatcgcgaccatcgtgcccggcgagcggctgagcgagcgagccaag
ccgatgcttgattacttgcagatgttcgagcgcagcttcaacgaattccccggcttcgaa
gtcgagattcagggcgtctatcgcgagttcgacgaattgggccgggttcgtctctacacc
tatgtcgtggccgaatag
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