Rhodopseudomonas palustris TIE-1: Rpal_2869
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Entry
Rpal_2869 CDS
T00722
Name
(GenBank) DNA gyrase, A subunit
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
rpt
Rhodopseudomonas palustris TIE-1
Brite
KEGG Orthology (KO) [BR:
rpt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rpt03032
]
Rpal_2869
03400 DNA repair and recombination proteins [BR:
rpt03400
]
Rpal_2869
Enzymes [BR:
rpt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
Rpal_2869
DNA replication proteins [BR:
rpt03032
]
Prokaryotic type
DNA Topoisomerases
Rpal_2869
DNA repair and recombination proteins [BR:
rpt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Rpal_2869
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
ACF01377
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Position
3130854..3133595
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AA seq
913 aa
AA seq
DB search
MSDKDDEKPEGPQAPSDIRPVSILDEMKRSYLDYAMSVIVARALPDARDGLKPVHRRILY
GMYENGFEWNKQYRKSARTVGDVIGKYHPHGDQSVYDALVRMAQDFSMRVPLIDGQGNFG
SVDGDMPAAMRYTESRLTKIAQTLLDDIDKDTVDFQPNYDNSEREPQVLPAKFPNLLVNG
AGGIAVGMATNIPPHNLGEVIDACIALIDDPALSIDDLNKIVPGPDFPTGGIILGRAGIR
AAYQTGRGSIVMRGKVEIETVRKDREAIIVSEIPYQVNKATMVERIAELVREKKIEGIGD
LRDESDRDGFRVVIELRRDAVPEVVLNQLYKFTPLQTNFGANMVALEGGRPQLMNLKDLL
TVFVAFREQVVTRRTKFLLNKARDRAHILVGLAIAVANIDEIIRVIRNSPDPNTARETLM
SRDWPAADVAAMITLIDDPRHKLNPDGTARLSFEQAKAILDLRLQRLTALGREEISEELD
KLAVEIADYLEILRSRARVQAIVKTELGEVKAEFATPRRTVIAEQEGEVEDEDLIQREDM
VVTVSHAGYVKRVPLSTYRAQRRGGKGRSGMATREEDFVSRLFVASTHTPVLFFSSRGQV
YKEKVWRLPLAPPNGRGKALINILPLEQGERITTIMPLPEDEASWSELDVMFATTGGNVR
RNKLSDFVDVRRSGIIAMKLDEGEAIVDVQICTERDDVLLTAAGGQCIRFPVPDVRVFSG
RTSMGVRGIALSSGDTVISLSILRHFEATPAERSTYLKQSGAIRRAATGEENEPVETPEA
EAEEGDASAALSQERYAEMSASEQFVLTISENGYGKRTSSFEYRTTGRGGKGIVAMSVNS
RNGKLVASFPVEDSDQIMLVTDNGQLIRCPVEGIRVAGRSTQGVIVFNTADDEKVVSVER
IPETDDGENGNGG
NT seq
2742 nt
NT seq
+upstream
nt +downstream
nt
ttgtccgacaaagacgacgagaagcccgaggggccgcaggcgccctcggatattcgcccc
gtatccattctcgacgagatgaagcgcagctatctcgattacgcgatgagcgtgatcgtg
gcgcgagcgctgccggatgcgcgcgacgggttgaagccggtgcatcgccgtatcctctac
ggcatgtacgagaacggcttcgagtggaacaagcagtatcgcaagtcggcgcgcaccgtc
ggcgacgtcatcggtaagtatcacccacacggcgaccagtcggtgtacgacgcgctggtc
cgtatggcgcaagacttctcgatgcgcgtgccgctgatcgacggtcagggcaatttcggt
tcggtcgacggcgatatgccggcggcgatgcggtacaccgaatctcgcctgaccaagatc
gcgcagacgctgctcgacgatatcgacaaggacaccgtcgacttccagccgaactacgac
aattcggaaagggagccgcaggtccttcctgccaagttcccgaacctcttggtcaacggc
gccggcggcatcgcggtcggcatggccaccaatattccgccgcacaatctcggcgaggtg
atcgacgcctgtatcgcgctgatcgacgatccggcgctgtcgatcgacgatctcaacaag
atcgtgccgggtcctgacttcccgaccggcggcatcatcctcggccgcgccggcatccgc
gccgcgtatcagaccggccgcggttcgatcgtgatgcgtggcaaggtcgagatcgagacc
gtccgcaaggaccgcgaggcgattatcgtctcggagatcccgtaccaggtgaacaaggcc
accatggtcgagcgcatcgccgaactggtgcgcgagaagaagatcgaaggcatcggcgac
ctgcgcgacgaatccgaccgcgacggattccgcgtggtcatcgagctgcgccgcgacgcc
gtgcctgaagtggtgctcaatcagctctataagtttacgccgctgcagacgaatttcggc
gccaacatggtggcgctggaaggcggccggccgcagctgatgaacctgaaggatctgctg
acggtcttcgtcgcgttccgcgaacaggtcgtcacccgccgcaccaaattcctgctcaac
aaggcccgcgatcgcgcccacatcttggtcggcctcgcgattgcggtggcgaatatcgac
gagatcattcgtgtgatccgtaattcgcccgatccgaacacggcccgtgagaccctgatg
tcgcgcgactggccggcggcggatgtcgcggcgatgatcacgctgatcgacgatccgcgc
cacaagctcaatcccgacggcactgcgcggctgtcgttcgaacaggcgaaagcgattctc
gatctgcggctgcagcgcctcaccgcgctgggacgcgaagagatatccgaagagctcgac
aagctcgcggtcgaaatcgccgactatctggaaatcctgcgctcgcgggcgcgggtgcag
gcgatcgtcaagaccgagctcggcgaggtcaaggccgagttcgcaacgccgcgccggacc
gtgatcgccgagcaggaaggcgaggtcgaagacgaagacctgatccagcgcgaggacatg
gtggtgaccgtgtcgcacgccggctacgtcaaacgggtgccgctgtcgacctatcgggcg
cagcgccgcggcggcaagggccgctccggcatggcgacgcgcgaggaggatttcgtctcg
cggctgttcgttgcctcgacgcacacgccggtgctgttcttctcgtcgcgcggccaggtc
tacaaggagaaggtctggcggttgccgctggcgccaccgaacggccgcggcaaggcgctg
atcaacatcctgccgctggagcagggtgagcgcatcaccacgatcatgccgctgccggag
gacgaagcctcgtggagcgagctcgacgtgatgttcgccaccaccggcggcaacgtccgc
cgcaacaagctgtccgacttcgtcgatgtccgccgctccggcatcatcgcgatgaagctc
gatgagggcgaggcgatcgtcgacgtgcagatctgcaccgagcgcgacgacgtgctgctg
accgccgctggcggacagtgcatccgcttcccggtgccggacgtgcgcgtattcagcggc
cgcacctcgatgggcgtgcggggcatcgcgctgtcgtcgggcgacacggtgatctcgctc
agcatcctgcgccatttcgaagcgacgcctgccgaacgctcgacctatctcaagcagtcc
ggcgcgatccgccgtgccgcgaccggtgaggagaacgagccggtcgagacgccggaggcc
gaagccgaggagggcgatgcgtccgcggcgctgtcgcaggagcgttacgccgagatgtcg
gcgtctgagcaattcgtgctgacgatctcggagaacggctacggcaaacggacctcgtcg
ttcgagtaccgcaccaccgggcgcggcggcaaaggcatcgtggcgatgtcggtgaacagc
cgaaacggcaagctggtggcgtcgttcccggtcgaggattccgaccagatcatgctggtg
acggacaacggccagttgatccgctgcccggtcgaaggcatccgcgtcgccggccgctcg
acgcaaggcgtgatcgtgttcaacaccgcggatgacgagaaggtggtctcggtcgagcgc
atcccggagaccgacgacggcgagaacggcaacggcggctag
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