Rhodopseudomonas palustris TIE-1: Rpal_3004
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Entry
Rpal_3004 CDS
T00722
Name
(GenBank) Glycine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
rpt
Rhodopseudomonas palustris TIE-1
Pathway
rpt00260
Glycine, serine and threonine metabolism
rpt00460
Cyanoamino acid metabolism
rpt00630
Glyoxylate and dicarboxylate metabolism
rpt00670
One carbon pool by folate
rpt00680
Methane metabolism
rpt01100
Metabolic pathways
rpt01110
Biosynthesis of secondary metabolites
rpt01120
Microbial metabolism in diverse environments
rpt01200
Carbon metabolism
rpt01230
Biosynthesis of amino acids
rpt01240
Biosynthesis of cofactors
rpt04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
rpt00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
Rpal_3004
09102 Energy metabolism
00680 Methane metabolism
Rpal_3004
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
Rpal_3004
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
Rpal_3004
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
Rpal_3004
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
Rpal_3004
Enzymes [BR:
rpt01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
Rpal_3004
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Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
Poly_A_pol_cat
Motif
Other DBs
NCBI-ProteinID:
ACF01510
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Position
3270499..3271797
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AA seq
432 aa
AA seq
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MSTANPASAPDSFFSASLEQADPEIAAAIRGELGRQRHEVELIASENIVSRAVLEAQGSV
MTNKYAEGYPGNRYYGGCEFVDVAENLAIDRAKKLFGANFANVQPNSGSQMNQAVFLALL
QPGDTFMGLDLAAGGHLTHGAPVNMSGKWFKPVHYTVRREDQMIDMDAVAKLAEEAKPKL
IIAGGSAYPRAWDFKRFREIADSVGAYFMVDMAHFAGLVAGGVHASPVPHAHVTTTTTHK
SLRGPRGGLILTNDEALAKKFNSAIFPGLQGGPLMHVIAAKAVAFKEALQPDFKVYTKNV
VENAKALAETLRSAGFDLVSGGTDNHLMLVDLRPKGLKGNVSEKALVRAGITCNKNGIPF
DPEKPFVTSGLRLGTPAATTRGFGVAEFQQVGHLIAEVLNAIAQSSDGAAPLVEASVKQR
VKELTDRFPIYQ
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgagcacagccaatcccgcgtccgcgcccgacagcttcttctccgcctcgctggagcag
gccgatcccgagatcgccgctgcgatccgcggcgaactcggccgccagcgccacgaggtc
gagctgatcgcctccgagaacatcgtcagccgcgcggtgctggaagcgcagggctcggtg
atgaccaacaagtatgcggaaggctatccgggcaaccgctattacggcggctgcgaattc
gtcgacgttgccgagaatctggcaatcgaccgagccaagaagctgttcggcgccaatttc
gccaacgtccagccgaactccggcagccagatgaaccaggcggtgttcctggcgctgctg
cagcccggcgataccttcatgggcctcgatctcgccgccggcggccatctcacccacggc
gcccccgtcaacatgagcggcaagtggttcaagccggtgcactacacggtgcgccgcgaa
gaccagatgatcgatatggatgcggtcgccaagctcgccgaggaagccaagccgaagctg
atcatcgccggcggctcggcctatccgcgcgcctgggacttcaagcgcttccgcgagatc
gccgacagcgtcggggcgtatttcatggtcgacatggcgcacttcgccggcctcgtggcg
ggcggtgtccatgcttcgccggtgccgcatgcccacgtcaccacgacgacgactcacaag
tcgctgcgcggcccgcgcggcggcctgatcctcaccaacgatgaggcgctagccaagaag
ttcaactcggcgatcttccccggcctgcagggtggcccgctgatgcacgtgatcgccgcc
aaggcggtggcgttcaaggaagcgctgcagcccgacttcaaggtctacacgaagaacgtc
gtcgaaaacgccaaggcgcttgcggaaacgctgcgctcggccggcttcgatctggtttcg
ggcggcaccgacaaccatctgatgctggtcgacctgcggccgaaggggctgaagggcaac
gtctcggagaaggcgctggtccgcgccggcattacctgcaacaagaacggtatcccgttc
gaccctgagaagccgttcgtcacctcgggcctgcgcctcggcaccccggcggcgacgacc
cgcggcttcggcgtcgccgagttccagcaggttggtcacttgatcgccgaagtgctgaac
gcgattgcacaatcgtccgacggcgcggcgccgctggtggaagcctcggtgaagcagcgg
gtgaaggaattgaccgaccgcttcccgatttatcagtaa
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