Rhodopseudomonas palustris TIE-1: Rpal_3113
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Entry
Rpal_3113 CDS
T00722
Name
(GenBank) Serine-type D-Ala-D-Ala carboxypeptidase
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
rpt
Rhodopseudomonas palustris TIE-1
Pathway
rpt00550
Peptidoglycan biosynthesis
rpt01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rpt00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Rpal_3113
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rpt01002
]
Rpal_3113
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rpt01011
]
Rpal_3113
Enzymes [BR:
rpt01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
Rpal_3113
Peptidases and inhibitors [BR:
rpt01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
Rpal_3113
Peptidoglycan biosynthesis and degradation proteins [BR:
rpt01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
Rpal_3113
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
PBP5_C
Beta-lactamase2
Motif
Other DBs
NCBI-ProteinID:
ACF01619
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Position
3356526..3357767
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AA seq
413 aa
AA seq
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MSVLTSLLSPRSSLWRGLLAGLIAVAVGAGPVTAANQSVQGAKKDDSGFEAQAPSAILVD
AESGSVLFEKNADELRAPSSMMKLMTVETVFHLLKTGDLQLTQEYRVSENAWRNGGAPAG
GSTMFAEIHSIISVDNLLHGAIIQSGNDSCMVLAEGIAGSEAAFVEQMTKRARAIGLTQS
TFANSTGLPNPDNKMSVRELAKLARHIILTYPEYYPLFGEKEFTWNKIRQTNRNPLLNAM
PGADGFKTGYTKEGGYGMVGSAVQNGMRLIVVVNGLDDADDRASEAKKLLEWGFRNFESR
SLFANDATIGYARVFGGEKRYVPLTPAEPVRVMVRKNGSDKLIARIVYQGPVPAPVESGQ
RVGMVRVWRGPNLAVEVPLKAAEADPVGSTMRRALDGASELTIGLVRAGMAKL
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtcctgacttcgctgctttctccgcgctcgtccctatggcgcggcctgttggcg
ggcctgatcgccgtcgcggtcggggcagggccggtgaccgccgccaatcaaagcgtgcag
ggcgccaagaaggacgattccggtttcgaggcccaggcgccgagcgcgatcctggtcgat
gccgagagcggcagcgtgctgttcgagaagaacgccgacgaactgcgcgcgccgtcgagc
atgatgaagctgatgacggtcgagacggtgtttcatctgctcaagaccggcgatttgcag
ctcacccaggaataccgggtgagcgagaacgcgtggcgcaacggcggcgcgccggccggc
ggctcgaccatgttcgccgagatccacagcatcatctctgtcgacaatctgctgcatggc
gcgatcatccagagcggcaacgactcctgcatggtgctggcagaggggatcgccggcagc
gaggcggcgttcgtcgagcagatgaccaagcgggcccgcgcgatcgggctgacgcagtcg
accttcgccaattccaccgggctaccgaaccccgacaacaagatgagcgtgcgcgaactg
gccaagctcgcccggcacatcatcctgacctaccccgaatactacccgctgttcggcgag
aaggaattcacctggaacaagatccgccagaccaatcgcaatccgctgctgaatgcgatg
ccgggcgccgatggtttcaagaccggctacaccaaggagggcggctacggcatggtcggc
tcggcggtgcagaacgggatgcggctgatcgtagtggtgaacggtctcgatgacgccgac
gaccgcgccagcgaagccaagaagttgctggaatggggcttccgcaatttcgagtcgcgg
tcgctgttcgccaatgatgccacgatcggttacgcccgggtgttcggcggtgagaagcgc
tacgtgccgctgacgccggccgagccggttcgggtgatggtacgcaagaacggcagcgac
aagctgatcgcgcggatcgtgtatcaggggccggtgccggcgccggtcgaatcgggccag
cgggtcgggatggtccgggtgtggcgaggccccaacctcgcggtcgaggtgccgctgaag
gcggccgaggccgatccggtcggctcgacgatgcggcgcgcgcttgacggagccagcgag
ctgacgatcggcctggtgcgggccggcatggcaaagctctga
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