Rhodopseudomonas palustris TIE-1: Rpal_3135
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Entry
Rpal_3135 CDS
T00722
Name
(GenBank) Glycine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
rpt
Rhodopseudomonas palustris TIE-1
Pathway
rpt00260
Glycine, serine and threonine metabolism
rpt00460
Cyanoamino acid metabolism
rpt00630
Glyoxylate and dicarboxylate metabolism
rpt00670
One carbon pool by folate
rpt00680
Methane metabolism
rpt01100
Metabolic pathways
rpt01110
Biosynthesis of secondary metabolites
rpt01120
Microbial metabolism in diverse environments
rpt01200
Carbon metabolism
rpt01230
Biosynthesis of amino acids
rpt01240
Biosynthesis of cofactors
rpt04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
rpt00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
Rpal_3135
09102 Energy metabolism
00680 Methane metabolism
Rpal_3135
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
Rpal_3135
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
Rpal_3135
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
Rpal_3135
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
Rpal_3135
Enzymes [BR:
rpt01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
Rpal_3135
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GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-ProteinID:
ACF01641
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Position
complement(3381219..3382523)
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AA seq
434 aa
AA seq
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MGPSVAPHAVHTIANPGVSAAGLVAADHAVAAAIANEETRQRDSIELIASENFVSRAVLD
AQGSVLTNKYAEGYPHRRYYGGCANVDAIEDLAIARVNQLFGSAYANVQPHSGSQANQAV
FLALLAPGDTILGLDLKAGGHLTHGAPVNMSGRWFKAVSYGVDPETHRIDMDQVAAQARQ
HRPRLLIAGGSAYPRIIDFGRFRQIADEVGAILMVDMAHFAGLVAGGVYPSPVPFADVVT
STTHKTLRGPRGGFVLTNDANIAKKINSATFPGLQGGPLMHVIAAKAVAFGEALQPEFGA
YAQAVVENCRVLAQALADGGLTITSGGTDCHLAVVDLRPFGVTGNIAEQALESVGITLNK
NAIPNDPEKPMVTSGIRVGTAAGTSRGFGADQYREIAGLVLETLHAVRAGTLDAERQAIN
KRVRRLAASFPLPY
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atgggtccatccgttgcgccgcacgctgtccacaccatcgcaaacccaggcgtgagcgcc
gccggcctagtcgcggctgatcacgctgtcgcggccgcgatcgccaatgaagaaacccgc
cagcgcgactcgatcgagctgatcgcctcggagaatttcgtcagccgggcggtcctcgat
gcgcagggatcggtactgactaacaaatatgccgaaggctatccacatcgtcgctactac
ggcggttgcgcgaatgtcgacgcgatcgaggatctggcgatcgcccgtgtcaatcagctg
ttcggcagcgcctacgccaacgtccagccgcattcgggaagccaagccaatcaggcggtg
tttctcgcactgctcgcacccggcgatacgatccttggcctggatttgaaggccggcggc
catctgacccatggggcgccggtcaacatgtccggccgctggttcaaggccgtcagctac
ggcgtcgaccccgagactcatcgcatcgacatggatcaggtggcggcacaggcgcgccag
catcgcccaaggctgctgattgctggcgggtcggcctatccgcggatcatcgatttcggc
cgcttccgccagatcgccgacgaggttggagcgatcctgatggtcgacatggcccacttc
gccgggctcgtggccggaggcgtttatccgtcgcctgttccgtttgccgatgtcgttacc
tcgacgacgcacaagacgcttcgtggtccgcgcggcgggttcgttctgaccaacgatgcg
aacatcgccaagaagatcaattcagcgacgttccccgggcttcagggcggcccgctgatg
catgtgattgccgcgaaggccgtcgcttttggcgaggcgctgcaaccggagttcggagcc
tatgcgcaggccgtcgtcgagaattgccgcgtgctggcgcaagcgcttgcggatggcggg
ctgacgatcacctcgggcggcaccgattgccatctcgccgtcgtcgatctgcgaccattc
ggcgtgaccggtaatatcgccgagcaggctttggagtcggtagggatcacgctcaacaag
aacgcgatcccgaacgatcccgagaaaccaatggtgacgtcgggtatccgtgtgggaacg
gctgccggcacgtcccgcggcttcggcgcggaccagtatcgcgagattgccgggcttgtc
ctcgaaacgctccacgccgtccgcgccgggacgctggatgcagagcggcaagcgatcaac
aagcgcgttcggcgactggccgcgagctttccgctcccttactga
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