Rhodopseudomonas palustris TIE-1: Rpal_3403
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Entry
Rpal_3403 CDS
T00722
Name
(GenBank) transcriptional regulator, LysR family
KO
K03717
LysR family transcriptional regulator, transcriptional activator of nhaA
Organism
rpt
Rhodopseudomonas palustris TIE-1
Brite
KEGG Orthology (KO) [BR:
rpt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rpt03000
]
Rpal_3403
Transcription factors [BR:
rpt03000
]
Prokaryotic type
Helix-turn-helix
LysR family
Rpal_3403
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_30
HVO_A0261_N
HTH_24
HTH_8
Motif
Other DBs
NCBI-ProteinID:
ACF01905
LinkDB
All DBs
Position
complement(3640925..3641803)
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AA seq
292 aa
AA seq
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MNVLNYNHLRYFWAVAHDGNLTRTAQRLNLTQSALSVQIRKLEERIGHALFERRGRQLHL
TEAGRITLDHADAIFATGEELIDTLRNTGVARQALRVGALATLSRNFQMAFLRPVLGRPD
VELILRSGSAAELLQLLAALSLDVVLINHAPARDSVNRLVVHRLAERSVSLIGTRARLRR
KGSLEDRLRGHPVIVPTAGSSIRMGFDALVARLGIRPQIAAEVEDMAMMRLLAREDLGLA
VLPPIVVKDELDDGRLIEAERLAGIVETFYAVTIERRFPNPVLTKLLRAKKI
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtgctcaactacaatcatctgcgctacttctgggcggtcgcgcatgacggcaat
ctgacccgcacggcgcagcggctgaacctgacgcagtcggcgctgtcggtgcagatccgc
aagctcgaggagcggatcggccacgcgctgttcgagcgccggggccggcaactgcatctc
accgaagccggccgcatcaccctcgatcatgccgacgcgatttttgccaccggtgaggag
ctgatcgatacgctgcgcaacaccggggtggcgcgacaggcgctgcgggtgggggcgctg
gcgacgctgtcgcgaaactttcagatggcgtttctgcgaccggtgctcggccggcccgac
gtcgaactgatcctgcgctcgggcagtgcggcggagctgctgcaactgctcgcggcgctg
agcctcgatgtggtgctgatcaaccacgccccggcgcgcgatagcgtcaaccgcctggtg
gtccaccggctggccgagcgctcggtcagcctgatcgggacccgcgcccggctgcggcgg
aagggaagtctcgaagaccggttgcgcggccatccggtgatcgtgccgaccgcgggcagc
agcatccggatgggtttcgacgcgctggtggcgcggctcgggatccggccgcagatcgcc
gccgaggtcgaggacatggcgatgatgcgtctgctggcgcgcgaagatctcggcctcgcc
gtgctgccgccgatcgtggtcaaggacgagctcgatgatggccggctgatcgaagccgag
cggctcgccggcatcgtcgagaccttctacgcggtgacgatcgagcggcgctttcccaat
ccggtgctcaccaaactgcttcgggcgaagaagatctag
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