Rhodopseudomonas palustris TIE-1: Rpal_3728
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Entry
Rpal_3728 CDS
T00722
Name
(GenBank) exodeoxyribonuclease III Xth
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
rpt
Rhodopseudomonas palustris TIE-1
Pathway
rpt03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rpt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Rpal_3728
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rpt03400
]
Rpal_3728
Enzymes [BR:
rpt01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
Rpal_3728
DNA repair and recombination proteins [BR:
rpt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
Rpal_3728
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
RuBisCO_small
Motif
Other DBs
NCBI-ProteinID:
ACF02228
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All DBs
Position
complement(3989446..3990216)
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AA seq
256 aa
AA seq
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MKIATFNVNNVNKRLPVLLAWLKTARPDVVCLQELKAADTDFPEAALRKAGYAAAWAGQK
SWNGVAILARRREIVVTRRRLPGAPHDKQSRYIEAAVAGIIVGCLYAPNGNPQPGPKFDD
KLAWLKRLNRHAATLLKSGAPVVLAGDFNVVPTPADIYPGKSWDKDALVQPEPRKLFAAL
LRQGWTDALRHSHPEDAPYTFWSYWRNRFERDAGLRIDHLLLDPSLAARLKRAGVDRKVR
AAPEASDHAPAWVVIE
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
gtgaagatcgcgaccttcaacgtcaacaatgtcaacaagcggctaccggtactgctcgcg
tggctgaagacggcgcggccggacgttgtctgcttgcaggagctgaaggcggccgacacg
gattttccggaagcggcgctgcgcaaggcgggctatgcggcggcgtgggccgggcagaaa
agctggaacggcgtggcgatcctcgcgcgccggcgcgagatcgtggtgacgcggcgccgg
ctgcccggcgcgccgcacgacaagcagagccgctacatcgaggcggcggtcgccgggatc
atcgtcggctgcctgtatgcgcccaacggcaacccgcaaccggggccgaaattcgacgac
aagctcgcctggctgaagcggctgaaccgtcatgccgcgacgctgctgaagagcggtgcg
ccggtggttctggccggcgacttcaacgtcgtgccgacgccggccgatatctacccgggc
aagtcatgggacaaggacgcgctggtgcagccggagccgcgcaagctgttcgcggcgttg
ctgcgccagggctggaccgatgcgctgcggcacagccacccggaggacgcgccctatacg
ttctggtcgtactggcgaaaccggttcgagcgcgatgccggtctgcggatcgatcacctg
ctactcgatccgtcgctggcggcgcggctgaagcgggccggcgtcgatcgcaaggtgcgg
gcggcgccggaggcgagcgatcacgcgcccgcctgggtcgtgatcgagtga
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integrated database retrieval system
