Rhodopseudomonas palustris TIE-1: Rpal_3927
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Entry
Rpal_3927 CDS
T00722
Name
(GenBank) DNA-cytosine methyltransferase
KO
K00558
DNA (cytosine-5)-methyltransferase 1 [EC:
2.1.1.37
]
Organism
rpt
Rhodopseudomonas palustris TIE-1
Pathway
rpt00270
Cysteine and methionine metabolism
rpt01100
Metabolic pathways
Module
rpt_M00035
Methionine degradation
Brite
KEGG Orthology (KO) [BR:
rpt00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
Rpal_3927
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rpt03000
]
Rpal_3927
03032 DNA replication proteins [BR:
rpt03032
]
Rpal_3927
03036 Chromosome and associated proteins [BR:
rpt03036
]
Rpal_3927
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
rpt02048
]
Rpal_3927
Enzymes [BR:
rpt01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
Rpal_3927
Transcription factors [BR:
rpt03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
Rpal_3927
DNA replication proteins [BR:
rpt03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
Rpal_3927
Chromosome and associated proteins [BR:
rpt03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
Rpal_3927
Prokaryotic defense system [BR:
rpt02048
]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
Rpal_3927
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_methylase
Cons_hypoth95
Methyltransf_15
Motif
Other DBs
NCBI-ProteinID:
ACF02424
LinkDB
All DBs
Position
complement(4212723..4214225)
Genome browser
AA seq
500 aa
AA seq
DB search
MATSTAIRQKLARLRGGGKVRVLDLFSGCGGLSLGFHAVGCEIVAAVEHDPDAAKSHGLN
FHAGSPVHMEPRDISSTPPANLTKALGLGHHSLAFDVVIGGPPCQAFARVGRSKLREVAD
HPEAFRHDPRARLYIEYLDYVEECAPLAVLMENVPDVLNHGGHNIAEEISEVLESRGYRC
GYTLLNAARYGVPQMRERMFLIAYRKELQQTVEFPKPTHWVDLPAGYEGSRAVALKLLSR
DLFSESGHYVPAPDAGRNLKPAVTAKQAIGDLPTIYARKLLADGLLTRGARRFNVPIAFN
RPRSISRYAEEMRSWPGFPAKAALYDHVIRYLPRDYELFSRLRPGDQYPQAYQCALKMFE
EKLAQLRKKKAAPESGTAAWNRLRDSIVPPYDPDKFPNKWRKMEEDWPARTLMAHLGKDS
YSHIHYDSDQARTISVREAARLQSFPDGFVFSGTMNPAFRQIGNAVPPLLAKRLAEMLVS
RMRAGVAAKEATNELAEAVG
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atggccacatctacagcaatccgtcagaagcttgcgcggcttcgagggggcggaaaagtc
cgtgtcttagatttgttttcgggctgcggggggctgtctttaggctttcatgccgtcggg
tgtgagattgtcgctgctgttgagcatgatcccgatgccgccaaatcgcatggtctaaac
ttccatgccggctcaccggtccacatggagcctcgcgatatatcgtccactccgcctgcg
aacctcaccaaggctctgggcctggggcaccattcgcttgcttttgacgttgtgattggg
gggcccccttgccaagcgttcgcccgcgtgggtcgatccaagcttcgtgaagttgccgac
caccccgaagcgtttaggcacgatccccgcgctcgtctgtatatcgagtatctcgattac
gtcgaggaatgcgcgcctcttgctgtcctgatggagaatgttcccgatgttctcaatcat
ggaggtcacaacatcgctgaggaaatcagcgaagttctggagagccgaggctatcgttgc
ggctacactttgctgaacgctgcgcgctatggcgtaccgcagatgcgggagcgcatgttt
ttgatcgcgtatcgaaaagaactgcaacagaccgtcgagtttcccaagccgacgcattgg
gtagatctgccagccgggtatgaaggttcaagagcggtcgcgctaaaattgctttcaaga
gatttgttctctgaaagcggacactatgtcccggcgcctgacgctggccgaaatctgaag
cccgcagtaacagcaaaacaggccattggggatctgccaaccatttatgcacgcaagttg
ctggctgatggcctgcttacccgaggcgcgcgccggttcaacgtgccaatcgccttcaat
cgcccacgttcgatcagccgatacgcggaggagatgcggtcttggccaggtttccctgca
aaggcggccctatatgatcacgtaattcgttatctgccgcgcgactacgagcttttttct
cgcttgcgcccaggcgatcagtatccgcaggcctatcagtgtgcacttaagatgttcgaa
gagaagctcgcgcagcttcggaagaagaaggctgcgcctgagtctggtacagctgcttgg
aacagactgcgagatagtatcgttccgccatacgatcctgacaaatttcccaacaagtgg
cgaaaaatggaggaggactggccggcccgcactctgatggctcacttgggcaaggatagc
tatagccatatccactacgacagcgatcaagcccgtaccatctctgttagggaagcggcg
cgtctgcagtcgtttcccgacggctttgtattctctgggactatgaatcctgcgttccgg
cagatcggaaatgcggtgccaccactgcttgcaaaacgccttgctgagatgctcgttagt
aggatgcgcgccggcgtagcggccaaggaagccaccaatgagttggcggaggccgttgga
tga
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