Rhodopseudomonas palustris TIE-1: Rpal_4166
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Entry
Rpal_4166 CDS
T00722
Name
(GenBank) glycogen debranching enzyme GlgX
KO
K01214
isoamylase [EC:
3.2.1.68
]
Organism
rpt
Rhodopseudomonas palustris TIE-1
Pathway
rpt00500
Starch and sucrose metabolism
rpt01100
Metabolic pathways
rpt01110
Biosynthesis of secondary metabolites
Module
rpt_M00565
Trehalose biosynthesis, D-glucose 1P => trehalose
Brite
KEGG Orthology (KO) [BR:
rpt00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
Rpal_4166
Enzymes [BR:
rpt01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.68 isoamylase
Rpal_4166
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Gene cluster
GFIT
Motif
Pfam:
CBM_48
Alpha-amylase
Isoamylase_C
Motif
Other DBs
NCBI-ProteinID:
ACF02662
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Position
4466560..4468641
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AA seq
693 aa
AA seq
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MRLTAGTDSRLGATWDGRGTNFALFSANAHKVELCLFDAQGRRELERIELPERTEDVWHG
YLNDVSPGQLYGYRVHGPYDPDRGHRFNAHKLLLDPYAKRLNGRLVWSEAHFAYRTGSPR
EDLSFDRRDNARGMPKAVVVDETVGSGRRETRPGVRWEDTIVYEAHVKGLTQLRDDVPPG
LRGTFGGLACPTMIAHLKRLGVTTIELLPVQGFVDDRVLVEKKLVNYWGYNTISFFAPEA
RYAPDKDNPLDSFRTTVARLHDAGIEVLLDVVYNHTAEGNHLGPTLSFRGIDNASYYWLK
PDNPRYYDDFTGCGNSMNLTHPRVLQMVMDSLRYWVEVCHVDGFRFDLATTLARGSNGFD
RNSGFFTAIRQDPILAGVKLVAEPWDLGMGGYQVGAFPSQWSEWNDRYRSVMRRYWSGEG
SLIGEVSRRMTGSSDMFNRDGRMPRASINHVTVHDGFTLADLFSYERKHNVANGEDNRDG
SNDNHSINCGVEGPTDDPKILGMRRQLRKNQLACLFLAQGVPLLLAGDEVGNSQAGNNNA
YCQDNEIGWVGWDGTNTEDDMVEFVGLMTDIRRRFPQLRSRRWLDGRRADGSYGVLWLTP
SAAEMTDQDWAFPDGRFLAYLLSPSEPGGSAIFIVLNSGVQEIEFHLPKLPEYQTWKELF
DTTKNTVQVATLGCGNPMIAPPRSVLAFSGTTE
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctcaccgccggaaccgactcccgtctcggagcgacctgggacgggcgcggcacc
aacttcgccctgttctccgccaacgctcacaaggtggagctctgcctgttcgacgcccag
ggccggcgcgagctggaacggatcgaactgccggagcgcaccgaagacgtctggcacggc
tacctcaacgacgtctcgcccgggcaactatacggctatcgggtgcatggcccgtacgat
cccgatcgcggccatcgcttcaacgctcacaagctgctgctcgacccctatgcgaagcgg
ctgaacggacggctggtgtggagcgaggcgcacttcgcctatcgcaccggctcgccacgc
gaggacctgtcattcgaccgccgagacaacgcgcgcggcatgccgaaggccgtcgtggtc
gacgagaccgtcggcagcggccgccgcgagacgcggcccggcgtgcgctgggaagacacc
atcgtttacgaggcccacgtcaaaggcctgacccagcttcgcgatgatgtgccgccggga
ctgcgcggcaccttcggcggcctcgcctgcccgaccatgatcgcacatttgaagcggctc
ggcgtcaccacgattgaacttttgccggtccaaggctttgtcgatgaccgcgtcctggtc
gagaagaagcttgtgaactactggggatacaacaccatctcgttcttcgcaccggaggcc
cgttatgcgccggacaaagacaatccactggactcgttccgcaccaccgtggcgcggctg
cacgatgccggcatcgaggtgctgctcgatgtggtctacaaccacaccgccgagggcaat
catctcgggcccacgctgtcgttccgcggcatcgacaacgcctcgtactactggctgaag
cccgacaacccgcgctactacgacgatttcaccgggtgcggcaattcgatgaacctcacc
catccgcgggtactgcagatggtgatggacagcctgcgctactgggtcgaagtctgccac
gtcgatggctttcggttcgacctcgccaccacgctggcgcgaggctcgaacggcttcgat
cgcaactcgggtttcttcaccgcgatccgtcaggatccgatcctggcaggcgtcaagctg
gtcgccgagccgtgggatctcggcatgggcggctatcaggtcggtgcgttcccgtcgcaa
tggtcggagtggaacgaccgctatcgcagcgtgatgcgacgttactggagcggcgaaggc
agcctgatcggcgaagtgtcgcggcgcatgacgggctcgtccgatatgttcaatcgcgac
ggcaggatgccgcgcgccagcatcaaccacgtcaccgtgcacgacggcttcacgctcgcc
gacctgttcagctacgagcgcaagcacaacgttgccaacggtgaggacaaccgcgacggc
tccaacgacaatcacagcatcaactgcggcgtcgaaggtccgaccgacgatccgaagatc
cttgggatgcgtcgccagctccgcaagaaccagctcgcctgcctgttcctggcgcagggc
gtgccgctgctgttggccggcgacgaggtcggcaattcgcaggccggcaacaacaacgcc
tattgccaggacaacgagatcggctgggtcggctgggacgggaccaacaccgaagacgac
atggtggaattcgtcggactgatgaccgatatccgccgccgcttcccgcagcttcgctcg
cggcgctggctcgacggacgccgcgccgacggctcctacggcgtgctgtggctgacgccg
tccgccgccgagatgaccgatcaggattgggcgttcccggatggccgcttcctggcttac
ctgctcagcccgagcgagccgggcggcagcgcgatcttcatcgtgctgaattcgggcgtg
caggagatcgaattccacctgccgaagctgccggaatatcagacctggaaagaacttttc
gacaccaccaagaacaccgtgcaggtggcgacgctgggctgcggcaatccgatgatcgcg
ccgccccgctccgtgctggcgttctccgggacgacggaatga
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