Rhodopseudomonas palustris TIE-1: Rpal_4238
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Entry
Rpal_4238 CDS
T00722
Name
(GenBank) 3-hydroxyacyl-CoA dehydrogenase NAD-binding
KO
K07516
3-hydroxyacyl-CoA dehydrogenase [EC:
1.1.1.35
]
Organism
rpt
Rhodopseudomonas palustris TIE-1
Pathway
rpt00071
Fatty acid degradation
rpt00362
Benzoate degradation
rpt00650
Butanoate metabolism
rpt01100
Metabolic pathways
rpt01120
Microbial metabolism in diverse environments
rpt01200
Carbon metabolism
rpt01212
Fatty acid metabolism
Module
rpt_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
rpt00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
Rpal_4238
09103 Lipid metabolism
00071 Fatty acid degradation
Rpal_4238
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
Rpal_4238
Enzymes [BR:
rpt01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
Rpal_4238
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Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
ApbA
Pyr_redox_2
DAO
NAD_binding_2
Pyr_redox
F420_oxidored
ThiF
NAD_Gly3P_dh_N
TrkA_N
FAD_binding_3
Motif
Other DBs
NCBI-ProteinID:
ACF02734
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All DBs
Position
complement(4551040..4553139)
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AA seq
699 aa
AA seq
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MSEVVTRATQDQVAIVTVDSPPVNALSAAVRRGILENVNAAVADPAVQAIVLVCAGRTFI
AGADITEFGKPAQPPALNDVIAALENSPKPTIAAIHGTALGGGLEVALGCHFRVAVKEAK
LGLPEVKLGLLPGAGGTQRLPRAVGPELAVQMIVGGSPIGAAEALKHGLVEEIVENLVAG
AVAFAKKVLAEKRPLRRLRDDDSKLAAAKADRSIFTNAVAAMTKKARGLEAPFACADAIG
AAIDLPFEEGLKKEREGFMKLVVSDQSKAQRYAFFAEREAAKVDGVPDGTKPRAVSRVAI
IGAGTMGGGIAMSFANAGIPVTLIETGEEQLKRGLGIMQKNWEATAARGGLPPDAPAKRM
ALITGVVGLENVKDADLIIEAVFETMAVKKEVFTAIDAHAKPGAVLASNTSYLSIDEIAA
TTKRPQDVLGMHFFSPANVMKLCEIVRGAKTAPDALLTAVSIAKKIAKVPVVVGVCDGFV
GNRMLAARSKQSEKLLFEGALPQQVDAVVTKFGMPMGPFAMGDLAGLDIGWRSRKDRGIK
SEIADALCEAGRFGQKTGKGYYKYEQGSRAPMPDPEVETLINDTLAKLGLKRRDITDEEI
LERMVYPMINEGARILEEKIAARPSDIDVVWLYGYGWPIYRGGPMHYADSVGLKHIAERL
SAYAKATNDPSLEPAPLLARLAAEGKTFASLTQPTKAAA
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaagtagtcacacgcgcaacgcaggatcaggtcgcgatcgtcacggtcgacagt
ccgccggtcaatgcgctcagtgcggctgttcgccgcggcattctggaaaacgtcaacgcc
gccgttgccgatcccgcggtgcaggcgatcgtgctggtatgcgcgggccgcaccttcatt
gccggtgccgatatcaccgaattcggcaagccggcgcagccgccggcgctcaacgacgtc
atcgccgcgctggagaattcgccgaagccgacgattgctgcgatccacgggaccgcgctc
ggcggtggcctcgaagtcgcgctcggttgccatttccgcgtcgccgtcaaggaagccaag
ctcggcctgccggaagtcaagctcggcctgctgccgggcgctggcggtacgcagcgcctg
ccgcgcgcggtcggtccggagctcgcggtgcagatgatcgtcggcggcagcccgatcggc
gccgctgaagcgctcaagcatggcctggtcgaagagatcgtcgagaatttggtcgcgggc
gcggtggcgttcgccaagaaggtgctggccgagaagcgcccgctgcgccggctgcgcgac
gacgattccaagctcgctgccgccaaggccgatcgctcgatcttcaccaatgcggtcgcg
gcgatgaccaagaaggcgcgcggcctcgaagcgccgttcgcctgcgccgacgcgatcggc
gccgcgatcgatctgccgttcgaagaagggctgaagaaggagcgtgagggcttcatgaag
ctcgtcgtctccgatcaatcgaaggcgcagcgctacgcgttcttcgccgagcgtgaagcc
gccaaggtcgatggcgtgccggacggcaccaagccgcgcgccgtgtcgcgcgtcgcgatc
atcggtgccggtaccatgggcggcggcatcgcgatgtcgttcgccaatgccggcatcccg
gtgacgctgatcgagaccggcgaggagcagctgaagcgcggcctcggcatcatgcagaag
aactgggaagccaccgcggcgcggggcggcctgccgccggatgcgccggccaagcgcatg
gcgctgatcaccggtgtggtcggcctcgaaaacgtcaaggacgccgacctgatcatcgag
gcggtgttcgaaaccatggcggtgaagaaggaagtgttcaccgccatcgacgcccacgcc
aagccgggcgcggtgctggcgtcgaacacctcgtatctgtcgatcgacgagatcgccgcc
accaccaagcgtccgcaggacgtgctcggcatgcacttcttctcgccggccaacgtgatg
aagctgtgcgaaattgtgcgcggcgccaagaccgcaccggacgcgctgctgaccgcggtg
tcgatcgccaagaagatcgccaaggtgccggtcgtggtcggcgtctgcgacggcttcgtc
ggcaaccgcatgctcgcggcccgctccaagcagtccgagaagctgctgttcgaaggcgcg
ctgccgcagcaggtcgacgccgtcgtcaccaagttcggcatgccgatgggcccgttcgcg
atgggcgatcttgccggcctggatatcggctggcgctcgcggaaagatcgcggcatcaag
tcggagatcgcggacgcgctgtgcgaagccggccgcttcggccagaagaccggcaagggc
tactacaaatacgaacagggctcgcgcgccccgatgcccgatccggaagtcgagacgctg
atcaacgacacgctcgccaagctcggcctcaagcgccgcgacatcaccgacgaggagatc
ctcgagcggatggtgtacccgatgatcaacgagggcgcccgcatcctcgaagagaagatc
gcggcgcggccgagcgacatcgacgtggtctggctatacggctacggctggccgatctat
cgcggcggcccgatgcactatgccgacagcgtcggcctcaagcacatcgccgagcggctg
tcggcctatgccaaggccaccaacgatccgtcgctggagccagccccgctgctcgcccgt
ctcgctgccgaaggcaagaccttcgcgtcgctgacgcagccgaccaaggccgcggcgtga
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