Rhodopseudomonas palustris TIE-1: Rpal_4520
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Entry
Rpal_4520 CDS
T00722
Name
(GenBank) transcriptional regulator, Crp/Fnr family
KO
K10914
CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
Organism
rpt
Rhodopseudomonas palustris TIE-1
Pathway
rpt02020
Two-component system
rpt02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rpt00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Rpal_4520
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Rpal_4520
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rpt03000
]
Rpal_4520
Transcription factors [BR:
rpt03000
]
Prokaryotic type
Helix-turn-helix
CRP/FNR family
Rpal_4520
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
HTH_Crp_2
MarR_2
HTH_29
HTH_3
UPF0175
Sigma70_r4
TrmB
Motif
Other DBs
NCBI-ProteinID:
ACF03015
LinkDB
All DBs
Position
complement(4870942..4871652)
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AA seq
236 aa
AA seq
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MTSMTTNLGRRSTKTSDVVRAQRLFQDLAPEALDQLCRAARLVRFSRGETVFLKGDDANA
LFVVVEGAIRVSSGSTDGRTAMLNLIGSGEVFGEVAVLDGLPRTTDAIAHSDSVLLSIAR
RDLFELIDTQPQLMMKLIVLLCGRVRATSQQVEWLMLQSMSARLAGTIMRLAERDTDRAP
LRLQLTQQQVSEMAGMSRESVNKLLARWASQGWIRLGPQTLEIFQPDALRAVAGEG
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcgatgacaacgaacctgggccgcaggtcgaccaagacatctgatgtcgttcgt
gcccaacggctgtttcaggatcttgcgcccgaagcgctcgaccagctctgccgcgccgcc
cgtctcgtcaggttcagccgcggagaaaccgtcttcctcaagggagacgacgcgaatgct
ctgtttgtcgtggtcgaaggcgcaatccgggtgagctcgggttcgaccgatggacgcacc
gcgatgctcaatctgatcggcagtggcgaggtcttcggcgaggtggccgtgctggatggg
ctgccacggacaacggatgccatcgcccacagcgactccgttctgctatcgatcgcgcgg
cgcgaccttttcgaactgatcgacacgcagccgcagctgatgatgaagcttatcgttctg
ctctgtgggcgggtacgcgcgaccagccagcaggtcgaatggttgatgctgcagtcgatg
tcggcccggctcgccggcacgatcatgcggctggcagagcgtgacaccgatcgggctccg
ctacgtctccaactgacgcagcagcaggtcagcgagatggccggcatgtctcgcgaaagc
gtcaacaagctgctggcgcgctgggcctcgcaggggtggatcaggcttggaccgcagacg
ttggagatctttcagcctgacgccctacgtgcggttgcgggcgaaggctga
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