Rhodopseudomonas palustris TIE-1: Rpal_4944
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Entry
Rpal_4944 CDS
T00722
Name
(GenBank) Pyridoxal-dependent decarboxylase
KO
K01593
aromatic-L-amino-acid/L-tryptophan decarboxylase [EC:
4.1.1.28
4.1.1.105
]
Organism
rpt
Rhodopseudomonas palustris TIE-1
Pathway
rpt00350
Tyrosine metabolism
rpt00360
Phenylalanine metabolism
rpt00380
Tryptophan metabolism
rpt01100
Metabolic pathways
rpt01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
rpt00001
]
09100 Metabolism
09105 Amino acid metabolism
00350 Tyrosine metabolism
Rpal_4944
00360 Phenylalanine metabolism
Rpal_4944
00380 Tryptophan metabolism
Rpal_4944
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rpt04147
]
Rpal_4944
Enzymes [BR:
rpt01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.28 aromatic-L-amino-acid decarboxylase
Rpal_4944
4.1.1.105 L-tryptophan decarboxylase
Rpal_4944
Exosome [BR:
rpt04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
Rpal_4944
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyridoxal_deC
Beta_elim_lyase
Aminotran_5
Aminotran_1_2
PDXDC1-like_cen2
Motif
Other DBs
NCBI-ProteinID:
ACF03433
LinkDB
All DBs
Position
5326034..5327494
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AA seq
486 aa
AA seq
DB search
MSDAVRAGANAGATSLDPDNWDALRADAHRMLDDMLDYIADVRDRPVWQPIPPAVRVGFA
EPLPRQGTPLPEVYRRFTEEIAPYATGNVHPGFMGWVHGGGTAVGMLAEMLAAGLNANCG
GRDHIGIEVERQIVRWLRELFGFPQTASGVFVTGSSMANFMALLVARTAAVGPQVREGGL
PGERLTAYASAAAHGCVVQAADLAGLGRGALRRIPFGKDHRIDIDALKRRIAEDRAAGCQ
PFLVTGSAGTVDVGAIDDLAALAELCRDEGLWFHVDGAYGSLGMLSDEIAPKLKGLSEAD
SIALDFHKWGQVNYDAGFLIVRDGEQHRDTFAAPAAYLRRETRGLAGGSPWPCDYGPDLS
RGFRALKTWFTLKTFGADRMGAMIAQTCKVARYLEARVEREPQLEMLAPVTLNIVCFRYR
AAPNVMDSLNAEIVVDLHESGIAAPSSTTIDGALAIRAAIVNHRTTFADVDKMVDAVLRF
GKARVG
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgacgcggtccgcgccggcgcgaatgccggcgcaacgagcctcgatcctgacaat
tgggacgcgctgcgcgccgatgcgcatcgcatgctcgacgatatgctcgactacatcgcg
gacgtgcgcgaccgtccggtgtggcagccgatcccgcccgcggtgcgcgtcggcttcgcc
gaaccgctgccgcgccagggcacgccgctacccgaggtgtatcgccgtttcaccgaagag
atcgcgccttacgccaccggcaacgtccatccgggcttcatgggctgggtgcacggcggc
ggcactgcggtggggatgctggccgaaatgctggcggccggcctcaatgccaattgcggc
ggccgcgatcacatcggcatcgaggtagaacgccagatcgtgcgctggctgcgcgaactg
ttcggctttccgcaaaccgccagcggcgtgttcgtcaccggctcgtcgatggcgaacttc
atggcgctgttggtcgcgcgcaccgccgcggttggcccccaggtgcgcgagggcgggctg
ccgggcgaacggctcactgcttacgcttccgcagcggcgcacggctgcgtggtgcaggcc
gccgatctggccgggctcggccgcggcgcgctgcggcggattccattcggcaaggatcac
cgcatcgatatcgacgcgctgaagcggcggatcgcggaagatcgcgctgccggctgccaa
ccgttcctggtgaccggatcggccggcaccgtcgatgtcggcgcgatcgacgatctcgcc
gcactcgccgagctgtgccgcgacgaaggactgtggtttcacgtcgacggcgcctatggc
tcgctcggtatgctgtcggacgaaatcgcgccgaagctgaagggcctgtcggaggcggat
tcgattgcgctcgacttccacaaatggggtcaggtcaactacgacgccggcttcctgatc
gtgcgcgacggcgagcagcatcgtgatacgttcgcggcgccggccgcttacttgcgacgc
gaaacccgcggcctcgccggcggctcgccgtggccgtgcgactacggccccgacctgtcg
cggggttttcgcgcgctgaagacctggttcacgctgaagaccttcggcgccgaccggatg
ggcgcgatgatcgcccaaacctgcaaggtggcgcgctatctcgaagcccgtgtcgagcgc
gagccacagctcgagatgctggcgccggtgacgctgaacatcgtctgcttccgttatcgc
gccgcaccgaacgtgatggactcgctcaacgccgagatcgtcgtcgacctgcacgaatcc
ggcatcgctgcgccgtcctccaccaccatcgacggcgcattggcgatccgcgccgcgatc
gtcaaccaccgcacgacgtttgcggatgtcgacaagatggtggatgcggtgctcaggttc
ggcaaagcgagagtcggatag
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