Rhodopseudomonas palustris TIE-1: Rpal_4978
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Entry
Rpal_4978 CDS
T00722
Name
(GenBank) A/G-specific adenine glycosylase
KO
K03575
A/G-specific adenine glycosylase [EC:
3.2.2.31
]
Organism
rpt
Rhodopseudomonas palustris TIE-1
Pathway
rpt03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rpt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Rpal_4978
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rpt03400
]
Rpal_4978
Enzymes [BR:
rpt01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.31 adenine glycosylase
Rpal_4978
DNA repair and recombination proteins [BR:
rpt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Rpal_4978
Prokaryotic type
Rpal_4978
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX_4
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_8
Motif
Other DBs
NCBI-ProteinID:
ACF03467
LinkDB
All DBs
Position
complement(5357814..5358863)
Genome browser
AA seq
349 aa
AA seq
DB search
MRARPAALLAWYDRHRRTLPWRAPPGATADPYAVWLSEIMLQQTTVRAVGPYFDKFMARW
PTVTALGEASLDDVLKMWAGLGYYSRARNLHACAVAVTRQHGGRFPDTEEGLRALPGVGP
YTAAAIAAIAFSRRTMPVDGNIERVVSRLYAVEDELPKAKPRIKALAETLLGPSRAGDSA
QALMDLGATICTPKKPACALCPLMQGCTARLRGDAESFPRKAPKKTGALRRGAAFVVIRG
DQVLVRSRPAKGLLGGMTEVPNSDWLPDQDEAAAKAQAPALKGVGRWHRKAGVVSHVFTH
FPLELAVYVAHASAGTRAPTGMRWTQISTLSDEALPNLMRKVIAHGLGD
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
ttgcgcgcgcggcccgccgcattgctggcctggtacgaccggcatcgccgcaccctgccg
tggcgggcgccgcccggcgcgaccgccgatccctatgcggtgtggctgtcggagatcatg
ctgcagcagaccaccgttcgtgcggtcgggccgtatttcgacaagttcatggcgcggtgg
ccgacggtgacggcgctgggcgaggcctcgctcgacgacgtgctgaagatgtgggccggg
ctcggctactattcacgcgcccgcaacctgcacgcctgcgcggtggcggtgacgcgccag
cacggcggccgctttcccgacaccgaggaggggctgcgggcgctgcccggcgtcgggccc
tacacagcagccgccatcgccgcgatcgcgttcagccgccggaccatgccggtcgacggc
aatatcgagcgggtggtgtcgcggctgtacgcggtcgaggacgaactgccgaaggccaag
ccgcgcatcaaggcgctggccgagacgctgctcggcccgtcccgcgccggtgacagcgcc
caggcgctgatggatctcggcgccaccatctgcacgccgaagaagccggcctgcgcgctg
tgcccgctgatgcagggctgcaccgcacggctgcgcggtgatgccgagagctttccgcgc
aaggcgccgaagaagaccggggcgctgcgccgcggtgccgccttcgtggtgatccgcggc
gatcaggtgctggtccgcagccgccccgccaagggcctgctcggcggcatgaccgaggtg
ccgaactccgactggttgcccgatcaggacgaagccgccgccaaggcgcaggccccggcg
ctgaaaggcgtcggtcgctggcatcgcaaagccggcgtcgtcagccatgtgttcacgcac
ttcccgctggagctggccgtgtatgtggcgcatgcctcggccggcacccgagcccccacc
ggcatgcgctggacgcagatctcgacgctgtcggacgaagctttgcccaatctgatgcgc
aaggtgatcgcccacggcctcggtgattga
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