Rhodopseudomonas palustris TIE-1: Rpal_5079
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Entry
Rpal_5079 CDS
T00722
Name
(GenBank) Acyl-CoA dehydrogenase type 2 domain
KO
K00249
acyl-CoA dehydrogenase [EC:
1.3.8.7
]
Organism
rpt
Rhodopseudomonas palustris TIE-1
Pathway
rpt00071
Fatty acid degradation
rpt00280
Valine, leucine and isoleucine degradation
rpt01100
Metabolic pathways
rpt01110
Biosynthesis of secondary metabolites
rpt01212
Fatty acid metabolism
Module
rpt_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
rpt00001
]
09100 Metabolism
09103 Lipid metabolism
00071 Fatty acid degradation
Rpal_5079
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
Rpal_5079
Enzymes [BR:
rpt01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.8 With a flavin as acceptor
1.3.8.7 medium-chain acyl-CoA dehydrogenase
Rpal_5079
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Motif
Pfam:
Acyl-CoA_dh_N
Acyl-CoA_dh_1
Acyl-CoA_dh_M
Motif
Other DBs
NCBI-ProteinID:
ACF03568
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Position
complement(5466555..5467784)
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AA seq
409 aa
AA seq
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MAIITDNVVRDFTLKSANDKFSSEAMPLMQRVVHVAAIAAADAESVDREARFPKAAIDAA
REYGLLGAQIPIEFGGESASIHDIAEMCYALGRACASTAMIVAMHQTKVACLVRHGRGSA
WHEQLMRRIAAEQMLLASSTTEGNNGGNIRSSAAAIARTETGISLLRDATVISYGAEADG
VMTIARRADDAGASDQVLVVFTKDDYTLTPTLGWETLGMRGTCSTGFELRASGRADQVFA
EAYDRIHAQTMTPVAHLSWSSAWAGIAAAAVERAQAFVRKAARGAGGQMPPGAAHFTSAK
RSLTKLRAMIATHLEAYTAHEFDERALTSLDFQSSINLLKVEASELAVETVMSAMRACGL
SGYRNDGDFTLGRHLRDVLSAPLMINNDRILANIGTANLMSPVPASLRD
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atggcgatcatcaccgacaacgtggttcgcgacttcacccttaagtcggccaacgacaaa
ttcagttcggaagcgatgccgctgatgcagcgtgtggttcacgtcgcggcgattgccgcc
gctgatgctgaatcggtcgatcgcgaggcgcggttccccaaggccgcgatcgatgcggcg
cgcgaatacggtctgctcggcgcgcaaattccgatcgagttcggcggcgagagcgcctcg
atccacgacattgccgagatgtgctacgcgctcgggcgcgcctgcgcctccaccgcgatg
atcgtcgcgatgcaccagaccaaggtggcctgcctggtgcgccacggccgcggctccgcc
tggcacgaacagttgatgcggcggattgcggccgagcagatgttgttggcgtcgtcgacc
accgaaggcaacaacggcggcaacatccgctccagcgccgcggcgatcgcgcggaccgaa
accggcatctctctgctgcgcgacgcgactgtgatctcctacggtgccgaagccgacggc
gtgatgacgatcgcacgccgcgcggacgatgccggcgcctcggatcaggtcctggtggtg
ttcaccaaggacgactacacgctgacgcccacgctcggctgggagacgctcggcatgcgc
ggcacctgcagcaccggcttcgagctgcgcgccagcggtcgtgccgatcaggtgtttgca
gaggcctacgatcgcattcatgcgcagacgatgacgccggtggcacatctcagctggtcg
tcggcctgggcaggcatcgctgctgcggcagtggaaagggcgcaggcgttcgttcgcaag
gcggcgcgcggcgccggcgggcagatgccgccgggtgctgcgcacttcaccagcgccaag
cgctcgctgaccaagctgcgggcgatgatcgccacgcatctcgaggcctacactgcgcac
gaattcgacgaacgcgcgctgacctcgctggacttccagtcctcgatcaacctgctgaag
gtcgaagcctccgaactcgcggtcgagacggtgatgagcgcgatgcgggcttgcggcctg
tcgggttatcgcaatgacggtgattttaccctcggccggcacttgcgcgacgtgctgtcg
gcgccgctgatgatcaacaatgaccgcatcctcgccaacattggcaccgccaatctgatg
agcccggtgccggcgagcctgcgcgactga
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