Rhodopseudomonas palustris TIE-1: Rpal_5128
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Entry
Rpal_5128 CDS
T00722
Name
(GenBank) transcriptional regulator, IclR family
KO
K19333
IclR family transcriptional regulator, KDG regulon repressor
Organism
rpt
Rhodopseudomonas palustris TIE-1
Brite
KEGG Orthology (KO) [BR:
rpt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rpt03000
]
Rpal_5128
Transcription factors [BR:
rpt03000
]
Prokaryotic type
Helix-turn-helix
IclR family
Rpal_5128
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IclR_C
HTH_IclR
MarR_2
HTH_5
Dimerisation
HTH_69
Rrf2
MarR
Fe_dep_repress
HTH_Crp_2
HTH_24
TrmB
DUF742
DUF6000
Motif
Other DBs
NCBI-ProteinID:
ACF03617
LinkDB
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Position
complement(5514019..5514774)
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AA seq
251 aa
AA seq
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MDKAFIKGLRLLETLALSDQPRGVTDLANELKFTKSNVHRLLATLQSQGYVRQIPPHSTY
ELTTKLWELGHHVIQRMDLVRVARPAMTRLAEITGETVHLSVLDGTEVLYVDKIESAHHI
RAHTSVGMRAPAFTVATGKAMLAQMPDDYLEILRPHLKRYTDSTRTTLEELREDIRTIRS
QGYASVLHGEWREGIAACACAIIGRSGELIGAIGMSGPDIRVKRKQIKEYSVHVMEAART
IGMALGHGGVK
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
atggacaaagccttcatcaagggacttcgactgctcgagacccttgcgctcagcgatcaa
ccgcgcggggtcacggacctcgccaacgagctgaagttcaccaagagcaacgtgcaccgg
ctgctggcgacgttgcagtcacagggctacgtccgccagattccgccgcacagcacctat
gagctgaccaccaagctgtgggagcttggccatcacgtcatccagcgcatggatctggtt
cgggtcgcgcggccggcgatgaccaggttggccgagatcaccggcgagaccgtccacctg
tcggtgctcgacggcaccgaagttctgtatgtcgacaagatcgaaagcgcccatcacatc
cgcgcccacaccagcgtcggtatgcgcgcgcccgccttcacggtcgcgaccggcaaggcg
atgctggcgcagatgcccgacgattatctggaaatccttcgcccgcatctgaagcgctat
acggattcgacccgcaccacgctcgaggagctgcgcgaagacatccgcaccatccggtcg
cagggctatgcgtcggtgctgcacggcgagtggcgcgaaggcatcgccgcctgcgcctgc
gcgatcatcggccgttccggcgaattgatcggcgcaatcgggatgtccggcccggacatc
cgcgtcaagcgcaagcagatcaaggaatactccgtccacgtcatggaagctgcccgcacc
attggtatggcgctcggccatggcggtgtgaagtaa
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