Rhodopseudomonas palustris TIE-1: Rpal_5242
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Entry
Rpal_5242 CDS
T00722
Name
(GenBank) alpha amylase catalytic region
KO
K01187
alpha-glucosidase [EC:
3.2.1.20
]
Organism
rpt
Rhodopseudomonas palustris TIE-1
Pathway
rpt00052
Galactose metabolism
rpt00500
Starch and sucrose metabolism
rpt01100
Metabolic pathways
rpt01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
rpt00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
Rpal_5242
00500 Starch and sucrose metabolism
Rpal_5242
Enzymes [BR:
rpt01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.20 alpha-glucosidase
Rpal_5242
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Gene cluster
GFIT
Motif
Pfam:
Alpha-amylase
DUF3459
Alpha-amylase_C_2
Complex1_LYR
Motif
Other DBs
NCBI-ProteinID:
ACF03730
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All DBs
Position
complement(5653057..5654673)
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AA seq
538 aa
AA seq
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MESVTSVSWWAAGVLYQIYPRSFQDSNNDGIGDLRGIIDRLGYLSDLGVDAIWLSPIFPS
PMADFGYDVADYVGIDPIFGTMDDFDALVLTAHARGLKVILDLVPNHSSEQHPWFVESRS
SRHNPKRDWYIWRDPAPDGGPPTNWLSEFGGSGWEYDDATGQYYYHAFLKQQPDLNWRNP
EVRAAIYDAMRFWLRKGVDGFRVDVIWHLIKDDQFRDNPPNPDFRPGMPPHAALIPIYSA
DRPETLEVVAELRRVVDEFDHRLLIGEIYLPVERLVAYYGAELKGAQLPFNFALLSTPWR
AREIAALIDRYEQALPAGAWPNWVLGNHDRPRVASRVGPAQARVAAMLLLTLRGTPTMYY
GDELGMEQVEIAPEDVQDPFEKNVPGIGVGRDGCRTPMQWDASDNAGFSDVRPWLPLAPN
ATQDNVANLRADAQSILNLYRALLRLRRALPQLALGEYQPLAAEGELLLYRRHHQGRSVL
VALNLGPDPISAASDAIGLDGEVLLSTMLDRAGERIGATLDLRGSEGIIVGRAPEDLV
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atggaaagcgtgacgagcgtgtcgtggtgggcggcgggtgtgctgtaccagatctatccg
cgctcgtttcaggacagcaacaacgacggcatcggtgatctgcgcgggatcatcgatcgg
ctcggctatctgtccgatctcggcgtcgacgcgatctggctgtctccgatctttccgtca
ccgatggcggacttcggctacgatgtcgccgactatgtcggcatcgatccaatcttcggc
acgatggacgatttcgacgcgctggtgctcacggcccatgcccgcgggctcaaggtcatt
ctcgatctggtgccgaaccattcatccgaacagcatccctggttcgtcgagagccggtcg
tcgcggcacaatcccaagcgcgattggtacatctggcgcgacccagccccggacggcgga
ccgccgacgaattggctgtcggaattcggcggcagcggctgggagtacgacgacgccacc
ggccaatactactatcacgcctttctgaagcagcagccggacctcaactggcgtaatccg
gaagtgcgggccgcgatctatgacgcgatgcggttctggctgcggaagggcgtcgatggc
ttccgggtcgacgtgatctggcacctgatcaaggacgaccaatttcgcgacaacccgccc
aatccggattttcgccccggcatgccgccgcacgccgcgctgatcccgatttactccgcg
gatcggccggagacgttggaggtggttgccgaactgcgccgtgtcgtcgacgaattcgat
catcggctgctgatcggcgagatctatctgccggtggagcggctggtcgcgtattacgga
gcggagctgaagggcgcgcagctgccgttcaacttcgcgctgctgtcgacgccgtggcgt
gcccgggagattgcggcgctgatcgatcgctacgagcaggcattgccggccggcgcgtgg
ccgaactgggtgctgggcaatcacgaccggccgcgggtggcgagccgggtcgggccggca
caggcccgcgtcgccgcgatgctgttgctcacactgcggggcaccccgacgatgtattac
ggcgacgagcttggcatggagcaggtcgagatcgcgcccgaggacgtgcaggatccgttc
gagaagaacgtgcccggcatcggtgtcggccgcgatggctgccgcacgccgatgcagtgg
gacgcgtcggacaacgccgggttctcggatgtccggccgtggctcccgctggccccgaac
gccacccaggacaacgtcgctaatctgcgcgctgacgcgcagtcgatcctaaacctctat
cgcgctctgctgcggctacggcgcgcactgccccagctcgcgcttggcgagtatcagcca
ctcgccgcggagggcgagctgttgctgtatcgtcggcatcatcaggggcggtcggtcttg
gtggcgctcaatctcggcccggatccgatctcggcggcgtccgacgcgatcgggctagac
ggcgaggtgctgctgtcgaccatgctcgaccgcgccggcgaacgcatcggtgccacgctc
gacctgcgcggcagcgaaggcatcatcgtcggccgggcgccggaggacctcgtttag
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